Clostridium bornimense: CM240_1700
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Entry
CM240_1700 CDS
T03165
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clt
Clostridium bornimense
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clt03016
]
CM240_1700 (truB)
Enzymes [BR:
clt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CM240_1700 (truB)
Transfer RNA biogenesis [BR:
clt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CM240_1700 (truB)
Prokaryotic type
CM240_1700 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CDM68858
UniProt:
W6RWW4
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All DBs
Position
rep1:complement(1856378..1857247)
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AA seq
289 aa
AA seq
DB search
MINGVINVYKESGMTSFDVVRKIKKIAATGKVGHTGTLDPMATGVLPICIGKATKLVDYI
MGDYKVYRAEMKLGLKSDTLDSEGKILSEKPVSCNEEQIRKEFEKFIGEIVQVPPMYSAL
KVNGKRLYELAREGKEVHRDGRTITIYNIDIESIEIPYVRFKVKCSKGTYIRTLIDDIGE
GLGTGAIMTSLERVESGEAFNISNSYTLGEIENSIEDKIISIEDSLKKYPEKRFTKEAKK
LLVNGVKIGNPRLIGNVKEGILYRVYVEDLFIGLGLKDSIGFKIEKLFL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgataaacggtgtaataaatgtatataaagagtcaggaatgacttcgtttgatgtagta
agaaaaataaagaaaatagctgcaacaggtaaggttgggcatactggaacattagatcca
atggcaacaggagtacttcctatttgtattggtaaagcaactaaattagtagattatata
atgggtgattataaagtttatagagctgaaatgaagttaggattaaaaagtgatactcta
gatagtgaaggaaagattttatctgagaaacctgtaagttgcaatgaagagcaaataaga
aaagaatttgaaaaatttataggagaaatagttcaagttccaccaatgtattctgctctc
aaagtaaatggaaaaagactttatgaattagcaagagaaggaaaagaagttcatagagat
gggagaactattactatatataatattgatatagaaagtattgaaatcccatatgttaga
tttaaagttaaatgttcaaaaggaacatatattagaacattaatcgatgatataggagaa
ggtttaggaacaggagctataatgacaagtttagaaagagttgaaagtggagaagctttt
aatatttctaattcatatactcttggagaaattgaaaattcaattgaagataaaatcata
tcaatagaggattcactgaagaaatatcctgaaaaaagattcaccaaggaagctaagaag
cttcttgttaatggagttaagataggaaatccaagattaatcggaaatgtaaaagaagga
atattatatagagtctatgtagaagatttatttatagggttaggattaaaggattcaata
ggattcaagatagagaaactttttctctaa
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