Clostridium bornimense: CM240_1895
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Entry
CM240_1895 CDS
T03165
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
clt
Clostridium bornimense
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CM240_1895 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clt03019
]
CM240_1895 (rnc)
03009 Ribosome biogenesis [BR:
clt03009
]
CM240_1895 (rnc)
03036 Chromosome and associated proteins [BR:
clt03036
]
CM240_1895 (rnc)
Enzymes [BR:
clt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CM240_1895 (rnc)
Messenger RNA biogenesis [BR:
clt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CM240_1895 (rnc)
Ribosome biogenesis [BR:
clt03009
]
Eukaryotic type
90S particles
RNase
CM240_1895 (rnc)
Prokaryotic type
rRNA processing factors
CM240_1895 (rnc)
Chromosome and associated proteins [BR:
clt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CM240_1895 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
MobC_2
DUF6537
Cnd2
Motif
Other DBs
NCBI-ProteinID:
CDM69053
UniProt:
W6RXB6
LinkDB
All DBs
Position
rep1:complement(2086376..2087080)
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AA seq
234 aa
AA seq
DB search
MDKKILIEELSKRLKIEFNNRHLLLEAITHSSYAKPKIKVEYNERLEFLGDAVLQVVISD
YLYNKYKEKKEGELSKLRSLIVCENSLYKIATKWDLGKFIRMSKGEELTGGRHRVSILAD
AVEAIIAAIYLDRGMEIVRGFVLENFEEIINLATENKIIMDYKSKLQEYYQQLGDSEIVY
DTIRFEGPPHRRKFFVKVLVNNEIEGYGEGYSKKEGEQKAAKDLLNHLEVIDEK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaatactaatagaagagttgagtaagagattaaaaatagaatttaataac
agacatttgcttttagaagcaattacacactcatcatatgctaaaccaaagataaaagta
gaatataatgagagattggagttcttaggagatgctgtattacaagttgtaatatcagat
tatttatataataaatataaagaaaaaaaagaaggagaattatctaagctacgttctttg
atagtttgtgaaaattctttatataaaatagctactaagtgggatttaggaaaattcata
agaatgagtaaaggtgaagaacttactggtggtagacacagagtttctattttagctgat
gctgtggaagctataatagctgctatatatttagacagaggtatggaaatagtaagagga
tttgtcttagaaaattttgaagaaataattaatttagctacagagaataagataattatg
gattataaatcaaaattacaagaatattatcagcagttaggagattcagaaatagtatat
gatactataagatttgaaggtccacctcatagaagaaagttttttgttaaagtgttagtt
aacaatgaaatagagggttatggagaaggatactctaaaaaagaaggagaacaaaaagct
gcaaaagatttattaaatcatttggaggtaatagatgaaaagtag
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