Clostridium bornimense: CM240_1922
Help
Entry
CM240_1922 CDS
T03165
Symbol
priA
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
clt
Clostridium bornimense
Pathway
clt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CM240_1922 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_1922 (priA)
Enzymes [BR:
clt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CM240_1922 (priA)
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CM240_1922 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
DUF7129
ADDB_N
DUF87
Zn_ribbon_PF0610
SLFN-g3_helicase
Bac_DnaA
Viral_helicase1
T1R_D3-like
cobW
Zot
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
CDM69080
UniProt:
W6SHB4
LinkDB
All DBs
Position
rep1:complement(2110870..2113071)
Genome browser
AA seq
733 aa
AA seq
DB search
MELYAGIVIEVDHYGLDNIFTYKVPKEMNDTIAIGKRVTIPFGVSNKKIDGYVYEIYYCR
PESSNGYRIKYIKEIKDDIEHFTEEDKRVIQFIKDKYLATYIDCIRLITPPGADKGSKIK
IEKKLYIEKPLDGKFAKEPYMSIYNEVQCNEGKYSKSALSKSKSLSLSSINTLIKHQYIK
EEEKRILRYSSRNYIREEEKNLTLQQSMALTTINDSFYNKFLIHGVTGSGKTEVFIRLIE
ENLKKDKDVIILVPEISLTPQMVERIKGRLQIEIGVFHSKMSVGEKYDFWYSIKKKEIKV
AIGPRSALFLPFSNLGLIIIDEEHENTYKSETDPKYDAREVAEFLMDMKGGKVVLASATP
SLESYTKGKNGHYKLIEMEDRIPGAVMPKIEVVDMRSELSNGNSSIFSKSLYEKINDRLE
KKEQIILFLNRRGDSSFVSCRACGFVYKCPNCDVSLTLHRSENILECHYCGYRTRPQIKC
PKCKSKYIKFFGIGTEKVERLTKKAFPNANIERMDLDTMKGRNSFSEVYERLKNNEIDIL
IGTQMITKGFDFKNVTLVGVLAADLTLNIPQYKSAERTFQLLTQVAGRAGRGTKEGEVVI
QTYTPGNYAIQRAEKVDYKGFYNDEVDIRQAMKYPPFGEILLVNLFYSKEDEVIDTINVL
AKEMKAKFTNLSILGPVPCPILKINNNFRYQIIIKGELSQNINKNIKDFVYNIVKKKNSN
IKISVDINPNDLL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaactttatgcaggtatagtaattgaagtagatcattatggattggataatatattt
acatataaggtgccaaaggaaatgaatgatactattgctattggtaaaagggttactatt
ccttttggagttagtaataaaaaaatagatggatatgtatatgaaatatattattgtaga
ccagaaagtagtaatggttatagaataaagtatattaaagagataaaagatgatatagag
cattttacagaagaggataagagggttatacaatttataaaagataaatatcttgctaca
tatattgattgtataaggttaataacaccgcctggggcagataaaggatcgaagataaag
attgaaaaaaaattatatatagaaaaaccgttagatggtaaatttgctaaagaaccatat
atgtctatatataatgaagtacaatgcaatgaaggtaagtatagtaagagtgctcttagt
aagagtaaaagtttatcattgtcatctataaacactctgataaagcaccagtatataaag
gaagaagaaaagagaatacttagatatagcagtagaaattatattagagaagaagaaaag
aatttaacattacaacaaagtatggcactgaccactataaatgatagtttttacaataaa
tttttaatacatggagttaccggtagtgggaaaacagaagtatttataaggcttatagag
gaaaatttaaaaaaagataaagatgttattatattagtaccagaaatttcacttacaccg
cagatggtggaaagaataaagggaagattacaaatagaaatcggagtttttcactcaaag
atgagtgttggtgaaaaatatgatttttggtactctataaagaagaaagagataaaggtt
gctattggaccaaggtcggctctatttctaccgtttagtaacttaggattaattataatt
gacgaagagcatgaaaatacatataaatctgaaacagatcctaaatatgatgctagagaa
gtagctgaatttttaatggatatgaagggtggaaaagttgttttagcatctgccactcca
agtttagaaagctatacaaaagggaaaaatggtcattataagcttattgaaatggaagat
agaattccgggagcagtaatgcctaagattgaagtagtagatatgaggtctgaattaagc
aatggtaatagttctattttttctaaaagtttatatgaaaagataaatgatagattagag
aaaaaagaacaaataattttatttcttaatagaagaggggattcatcctttgtttcttgt
agagcttgtgggtttgtatataagtgtcctaactgtgatgtatcactaacacttcacagg
tcagaaaatatattagaatgtcattattgtggttatagaactaggccacaaattaagtgt
ccaaaatgtaaaagtaagtatataaagttttttggtataggaacagaaaaagttgaaagg
ttaactaaaaaggcttttccaaatgctaatatagaaagaatggatttagacactatgaag
ggaagaaattcttttagtgaagtttatgaaagacttaagaataatgaaatagatatatta
atagggacacaaatgataacaaagggatttgatttcaaaaatgtaacattggtaggtgtt
ttagcagcagatttaacacttaatattccacagtataaatctgctgaaaggacatttcag
ctattgacacaggttgcaggaagagctggaagaggaacaaaggaaggggaagtagtgata
caaacctatactccaggcaattatgcaatacagagggctgaaaaagttgattataaagga
ttttataatgatgaggtagatataaggcaggcaatgaaatatcctccttttggggaaatt
ttattagtaaatttattttatagtaaagaagatgaagttatagacactataaatgtttta
gcaaaggaaatgaaagctaagtttactaatttgtcaattcttggaccggttccttgtcct
attttaaaaataaataataattttcgatatcaaattattataaaaggggaattatctcaa
aatattaataaaaatatcaaagattttgtgtataatatagtaaagaaaaaaaatagtaat
ataaaaatttcagtagacataaatccaaatgatttactgtga
DBGET
integrated database retrieval system
