Clostridium bornimense: CM240_1986
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Entry
CM240_1986 CDS
T03165
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
clt
Clostridium bornimense
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_1986 (addA)
Enzymes [BR:
clt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CM240_1986 (addA)
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CM240_1986 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
CARD
AAA_12
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CDM69144
UniProt:
W6RZV2
LinkDB
All DBs
Position
rep1:complement(2176942..2180589)
Genome browser
AA seq
1215 aa
AA seq
DB search
MERKWTNEQQLAIDHDKSNILVSAAAGSGKTAVLVERIIKKITRKENAVDIDSLLVMTFT
NAAAMEMKERIAAAISKEIDKNPLDTRLQKQLIRLNKADITTMHSFCNRLIKKYFHLLDI
DPSFRIGDENECKLIRREAVLEVIEDRYDEENMRESFLLLAEGYTKNKSDVELEEIVLSL
YNDAMAMSFPERDLNRLLEKLDITDKSFEETIFCKIAMEEIIEGLREYREGYKEVLESLY
DYGYNDKVYDIIKSESEFIEELLAEKKGFFQLRNDVYNFEFLRMPTVKGVDEEGKAILSG
LRDGFKKYIKSISEKYFYFSTEEEISEEMTFLHTVSKGIIELVIDFKKVYEDKKKKRGIL
DYNDLEHYGLDILVDYSEEGEVIPSNVALELREKYSEVLIDEYQDTNEVQETIIKMIGRV
DVPNIFMVGDVKQSIYRFRNTNPQFFLQKYYDYSEDTNERDVKILLYKNFRSRKEVLTGI
NFLFKRIMSKELGDVDYTDVEALNPGASFNGEGEPIDLVLLDYKNIIAESDDEDKKELEI
EAKYICNRIENIVSGKEQLYIDDASVPDGRRIPTYKDIVILLRATAGHGDILKDALMERE
IPVFLDSSKGCFDSFEINIMMSLLEIIDNPLNDIPLIGVLRSPIGSFDEEELIKIRGEKA
KGGFYNCLKKYSKEENFLGNKAKIFLEKLKMYREKSIKMTLVDFLWYLYLDTNFYSFVAT
LSNGDIRQENLMLLLQKGREFENTSYKGLFNFINFINKIKISKGDFGSAITIGENENVVR
IMSIHKSKGLEFPIVFMPHLNKKFNMMDLRENILFHPRLGFGPKYISGEERVAHDTLVRS
VIKDSIETEVKSEEMRILYVALTRAKEKLILISANKDIDNLIKKGKEALKSSDIRLPSYI
VKKCSSYLQWIIISLMAHRDGNILRERIEGDLNFPSPIEDESKWNIEIIDSYNDDDSDIE
EENSLTVVEKLKGEEIGDKYTGIDNILNFRYKYKDVTNISPYITVSEIKRKYLEGNIKID
SNGVLTKGNYIEEIVAPKFLRDEKSLTRSQIGTAHHTVMEHLPLKMDSSVETVKELVDIL
VNKNILTEDEGKVINCSKISDFLRSDLCKDMVENEDTLLREFPIQLRISPSEVYDVEDDD
DKLVLNGIVDAFYEKDNELIIVDYKSDYYVEKKEMVEKYQVQLKLYKKALEKITGKKVRE
CILYLFYKSEYVKIY
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagaaaatggactaatgaacaacagctagctatagatcatgataaaagtaatatt
cttgtttcggcagctgctggttctggtaaaactgctgtgttggtagaaagaataataaaa
aagattactagaaaagaaaatgctgttgatatagattcattacttgttatgacttttact
aacgcagcagctatggagatgaaggaaagaatagcagcagcaatttctaaggaaatagac
aaaaatccattagatactagacttcagaagcaacttattagacttaataaggctgatata
actacaatgcattccttttgtaatagacttataaagaaatattttcatcttttagatata
gatccttcttttagaattggtgatgaaaatgaatgtaagcttataagaagagaagcggtt
ttagaagttattgaagatagatatgatgaagaaaatatgagagaatcttttttacttttg
gcagaaggttatacaaaaaataaaagtgacgtagaacttgaagaaatagttttatcttta
tataacgatgctatggctatgtcttttcctgagagggatttaaatagattattagaaaaa
ttagatattactgataagagttttgaagaaactatattttgtaagatagctatggaagaa
ataatagaaggattgagagagtatagagaaggatacaaagaagtattagaaagcctttat
gattatggttacaatgataaggtatatgacataataaaaagtgaaagtgaattcatagaa
gagcttttagcagaaaaaaaaggcttttttcagctaagaaatgatgtatataattttgaa
tttttaaggatgccgacagtaaaaggggtagacgaagaagggaaagctatattatcaggt
cttagagatggatttaaaaagtatatcaaaagtataagtgaaaaatatttttatttttct
acagaagaagaaataagtgaagaaatgacattcttacatactgtttcaaaaggtattata
gaattagttatagattttaaaaaagtctatgaagataaaaagaaaaaaagaggaatatta
gactataatgacttagaacattatggcttagatatattagtagattatagtgaggaaggg
gaagtgatcccttcaaacgtagcattagaacttagagaaaagtatagtgaagtgttaata
gatgaatatcaagatactaatgaagtacaagaaactattattaaaatgataggtagagtt
gatgttccaaatatctttatggttggtgatgtaaagcaaagtatttatagatttagaaat
acaaatccacaattctttttacaaaaatactatgattatagtgaagatactaatgaaaga
gatgttaaaatattattatataagaacttcagatctagaaaagaggttcttacaggtatt
aattttctttttaagagaataatgagtaaggaacttggtgatgtggattataccgatgta
gaagcattgaatccaggagcaagttttaatggggaaggtgaaccgatagatttagttctt
ttagattataaaaacataatagctgaaagtgacgatgaggataaaaaggaattagaaata
gaagcaaaatatatctgcaatagaatcgaaaatatagtaagtgggaaagaacaattgtat
attgatgatgcctcagttccagatggaagacgtataccaacctataaagatatagttata
ctacttagagccactgcagggcatggagatattttaaaagatgcgttgatggaaagggaa
ataccagtatttttagattcatcaaaagggtgttttgattcttttgaaattaatataatg
atgtcgcttcttgagataatagataatccattaaacgacataccacttataggggtactt
agatctccaatagggtcttttgatgaagaagagcttataaaaataagaggagaaaaagca
aaaggtggattttataattgtttgaagaagtatagcaaagaagaaaatttcctaggaaat
aaagctaagatatttttagaaaaattgaagatgtatagagaaaaaagtattaagatgacc
ttagttgattttttatggtacttatatttagatacaaatttctattcttttgtagcaact
cttagcaatggggatattagacaagaaaatttaatgctgttattacaaaaaggtagggaa
tttgaaaatacatcatataaaggattatttaatttcataaattttataaataagataaag
atatctaaaggtgactttggttctgcaataactattggagaaaatgaaaatgtagttagg
ataatgagtatacataagagtaagggactagaatttcctattgtatttatgcctcattta
aataaaaaatttaatatgatggatcttagagaaaatatactatttcacccgagacttggg
tttggccctaaatatataagtggtgaagaaagagttgctcatgatacattagttagaagt
gttataaaggattctatagaaacagaagtaaaaagcgaagagatgagaattctctatgtt
gccctaacaagagcaaaagaaaagctgattttgatatctgctaataaagatattgataac
cttattaaaaaaggtaaggaagcactaaaaagtagtgatattaggttacctagttatatt
gtaaaaaaatgctctagttatttgcaatggataattatatctttaatggctcatagagat
ggtaatattcttagagaaagaatagaaggggacttaaactttccatcaccaatagaagat
gaaagtaagtggaatatagagataatagattcttataatgatgatgatagtgatattgaa
gaagaaaattcacttacagtagtagagaagcttaagggagaagaaataggggataagtat
acaggtatagataatatacttaattttagatacaaatataaagatgtaactaacatatca
ccatatataacagtttcagaaataaagagaaagtatcttgaaggaaatattaaaatagat
agtaatggagttttaacaaaaggaaattatatagaagaaatagtagcgcctaagttttta
agagatgaaaaatctttaactaggtcacaaataggtactgcacatcatactgttatggag
catttaccacttaaaatggattcatcggtagaaacagtaaaagaattagtagatatatta
gtaaataaaaatatattgactgaagatgaaggaaaagtaataaattgcagtaagatttca
gatttcttaagaagtgatctatgcaaggatatggtagaaaatgaagatacacttttaaga
gaatttcctatacagctaagaatatctccaagtgaagtctatgatgtagaagacgatgat
gataaattggttttaaatggtatagtagatgctttttatgaaaaagataatgaattaatt
atagttgattataaaagtgattattatgttgagaaaaaggaaatggtagaaaaatatcaa
gttcagttaaagctttataaaaaagccttagaaaaaatcacaggtaaaaaagtgagagag
tgtatattatatttattttataaaagtgagtatgtaaagatatattag
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