Clostridium bornimense: CM240_1987
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Entry
CM240_1987 CDS
T03165
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
clt
Clostridium bornimense
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_1987
Enzymes [BR:
clt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CM240_1987
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CM240_1987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Toprim
Motif
Other DBs
NCBI-ProteinID:
CDM69145
UniProt:
W6SHH9
LinkDB
All DBs
Position
rep1:complement(2180596..2183979)
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AA seq
1127 aa
AA seq
DB search
MALNIILGASGSGKTTRCFEEIDKKIKSESNSKMFMLVPEQFTFEGEKKLIDTLGEEVLL
RATVINFKRLGHKVFSKVGGAKEKSLDDCGKAMLIYYILNSDRLKFATFGTVAHQKGFAA
LIGDMIGEFKRYNVTYENLEEAYEKMSSKPTLRDKLFDLKEIYKVFNNETEGKFLDRDDE
LNVLMKKLEEYDYIKDSYVWIDEFSFFTPQQMKIIEKLLDLSKDVYITLNYEKLENQNTF
YLTETTLNKLQRMAEKNNVPINIEDLDGRGYKFLSQELKHLEENINSINVVANKEATKDI
ELNVAFNSFKEIEIVARDIVKEVREKNIRYKDIAVISRDIDSYTEYIKGIFNQYDIPFFI
DKKTSTENNNFIVFISSALEIINKNWSYETVFRYLKTYILDIDMEDIDILENYVLCHGIK
RKSKWVDKVWDYPVYNEYNPFETDEEFLEKINEIKETVVAPLRNLLEISKTKDTVKNIGE
KLYHFLEEANVKDHIKELVDSYSEEGEIALSEEYSQIWNKVMDILNSFVEVLGEEEMSLN
EFVKIFAVGVDHAEVGIIPTALDQVFIGGSDRSKSQDVKRVYLIGCNEGVFPMVSTNEGI
LNDTEREELNSIGMELGSDTLSKTYEEEFLVYTSLTTARESLVISYPVSDLNGKGRRPSR
VISKIKRIFPKITENNYVLSDKFTDKISSPKATFNEMILQINDCDEEDYPYLRDLYKWYE
NSKNYNETLSKMEEYFLYKNDPKVLSKESINSIYGGDIKASVTQFEKYAACPFAYYVTYG
LKAKERRTNEVSYPSIGSLLHEGIDKFCSDAVKNNIDFRDITEEYIGNAVDEIVAKLLEK
KENFLFLNTARMRFLVRKLKRVLRRSLKIIVKQLENSDFTPMGFEMKFDKDGELPPMIIS
KDGSTIYIVGKVDRVDCYSCDGNTYIRIIDYKLGSMEIDFSKIYNGLQLQLLTYLEAVME
SLDKKGENAVPCGVFYYKMDDPIIENKEHLTKEEIEEKINESLKLQGLLLKDKEVILAMD
NDFEKRKKSIVVNASLTSKGELAKSNSKGQITEADFSFLREFVKDKLEELCSNVLCGDIS
ITPYKLKEETPCKFCSYKSICHFDDTLEFNNYRVIEEKKKVDEMKGE
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaatataattttaggggcatctggtagtggaaaaactacaaggtgttttgaa
gagatagataaaaaaattaaaagcgaatcaaatagtaaaatgtttatgctagtgccagaa
caatttacttttgaaggtgaaaagaaacttattgatacattaggagaagaagtccttctt
cgtgcaacagtgataaattttaaaagattagggcataaagttttttcaaaagtcggtgga
gctaaagaaaagtctcttgatgattgcgggaaagcaatgcttatttattacatattaaat
agtgataggcttaagtttgcaacatttggcacagtagctcatcaaaaaggttttgctgct
ttaataggtgatatgataggggaatttaaaagatataatgttacttacgagaatttagaa
gaagcatatgaaaaaatgagctctaagcctacattaagagacaaactttttgatcttaaa
gaaatttataaagtttttaataatgaaacagaaggaaaatttttagatagagatgatgaa
ctgaatgttttgatgaagaaactagaggaatatgactatataaaagatagttatgtttgg
attgatgaattttcattttttactcctcaacagatgaaaataatagagaagttacttgat
ttatctaaagatgtgtatattacattgaactatgaaaaattagaaaatcaaaatactttt
tatttaacagagactaccttaaacaaacttcaaagaatggcagagaaaaataatgttcct
attaatattgaagacttagatggtagaggatataaatttttatctcaagagcttaagcac
ttagaagagaatattaatagtatcaatgttgtggctaacaaagaagctacaaaggatata
gagttaaatgttgcttttaatagttttaaagaaatagaaatagtggctagggatattgta
aaagaggtacgagaaaaaaatataagatataaggatatagcagttatttcaagagatata
gattcttatacagaatatataaaaggtatttttaatcaatatgatatacctttttttata
gataaaaaaactagtacagaaaataataattttattgtttttatttcttctgcattagag
ataatcaataaaaattggagttatgagacggtttttagatatttaaagacttatattctt
gatattgatatggaagatatagatatccttgagaattatgttttatgtcatgggataaag
agaaagtccaagtgggttgataaagtatgggattatccagtttataatgagtataatcct
tttgaaactgatgaggagtttttagaaaaaataaatgagataaaagagacggtggtggct
ccgcttagaaatttattagaaatatctaagacaaaggatactgttaagaatatcggagaa
aaactatatcattttctagaagaagctaatgttaaagatcatataaaagaacttgtagat
agctatagtgaagaaggagaaattgctcttagtgaagaatattcccaaatatggaataaa
gtaatggatattttaaattcttttgtagaagtattaggtgaagaggagatgtctcttaat
gagttcgtaaaaatttttgctgtgggagttgatcatgctgaagtagggattatacctacg
gcactagatcaagtatttattggtggtagtgataggtcaaaaagtcaggatgtaaaaaga
gtatatcttattgggtgtaatgaaggtgtttttcctatggtttcaactaatgaaggtatt
cttaacgatacggaaagagaagagcttaatagtataggtatggagctgggcagtgacact
ttatctaaaacttatgaggaagagtttctagtatatacatctcttacaacagcaagggaa
tctttagttataagctatcctgtttcggatcttaatggtaaaggcagacgaccatcaagg
gtaatttcaaagataaagagaatttttccgaagattacagaaaataattatgttttaagt
gataaatttacggataagatttcatcaccaaaagcaacttttaatgaaatgatattacaa
ataaatgattgtgatgaagaagattatccttatttaagagatttatacaaatggtatgag
aatagcaaaaattataatgagacattgagtaaaatggaagaatatttcttgtataaaaat
gatccaaaagtgttatcaaaggaatctataaatagtatttatggtggcgatataaaggca
tcagtaacacaatttgagaagtatgcagcgtgtccatttgcttattatgttacttatgga
ttgaaagcaaaagaaagaagaactaatgaagtatcatatccttctatagggtcattacta
catgaaggtatagataagttttgtagtgatgctgtaaaaaacaatattgattttagagat
attactgaagaatatattggaaatgctgtggatgagatagtagcaaagcttttagaaaag
aaggaaaatttcttatttttgaatacagcaaggatgaggttccttgtaagaaagctgaag
agagttcttagaaggtcactaaaaattattgttaaacaactagaaaattcagactttact
cctatgggctttgagatgaagtttgacaaagatggtgaattacctccaatgataatatca
aaggatggttcaacaatctatattgtaggtaaggttgatagagtagattgttatagttgt
gatggcaatacttatattagaataattgattataaattaggttctatggagatagacttt
tctaagatatataatggattacaattgcaacttttaacttatttagaagcagtaatggaa
tcattagataaaaaaggggagaatgcagttccttgtggagtattttattataaaatggat
gaccctattatagaaaataaggaacaccttactaaagaggagattgaagagaagataaat
gaatcattaaaattacaaggtttattattaaaagacaaagaagtaattttagctatggat
aatgattttgaaaagagaaaaaaatctatagttgttaatgcttctcttacatcaaagggt
gaactagctaagagtaattctaagggacaaatcactgaggcggattttagctttttaaga
gaatttgtaaaggataagttagaagaattatgttctaatgttttatgtggtgatatttcc
attacaccatataagttaaaagaagaaactccgtgtaagttttgttcatataagagtata
tgtcattttgatgatactttagagtttaataattatagagttattgaagaaaagaaaaaa
gttgatgaaatgaaaggggagtag
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