Clostridium bornimense: CM240_1988
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Entry
CM240_1988 CDS
T03165
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clt
Clostridium bornimense
Pathway
clt00260
Glycine, serine and threonine metabolism
clt00460
Cyanoamino acid metabolism
clt00630
Glyoxylate and dicarboxylate metabolism
clt00670
One carbon pool by folate
clt00680
Methane metabolism
clt01100
Metabolic pathways
clt01110
Biosynthesis of secondary metabolites
clt01120
Microbial metabolism in diverse environments
clt01200
Carbon metabolism
clt01230
Biosynthesis of amino acids
clt01240
Biosynthesis of cofactors
clt04981
Folate transport and metabolism
Module
clt_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CM240_1988 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CM240_1988 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CM240_1988 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CM240_1988 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CM240_1988 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CM240_1988 (glyA)
Enzymes [BR:
clt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CM240_1988 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
CNOT11
Motif
Other DBs
NCBI-ProteinID:
CDM69146
UniProt:
W6RWU0
LinkDB
All DBs
Position
rep1:complement(2184051..2185280)
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AA seq
409 aa
AA seq
DB search
MNFDNLKEIDPAIYEVVEKEHNRQESNIELIASENFTSKAVMEAMGSFLTNKYAEGYPGK
RYYGGCHEVDIAENIAKERMLQLFGGDHANVQPHSGSQANMAVYFSVLQPGDVVLGMDLS
NGGHLTHGSPVNFSGRLFDFKSYGVDDNGVIDYENVRTIAREVKPKLIVAGASAYSRTID
FAKFREIADEVGAMLMVDMAHIAGLVAAGVHPNPVPYCDFVTTTTHKTLRGPRGGAIICK
EKYAKVLDKNIFPGIQGGPLMHIIAGKAVCFGEALKDDFKEYGKNIVSNAKTLAEELMNY
GFNVVSGGTDNHLLLVDLRNKGITGKEAEKLLDSVSITTNKNTVPNETESPFVTSGIRIG
TAAVTTRGFGENEMKEIARFINDAIENRDKDLSALKAEVNALCAKFPIY
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgataatttaaaagaaatagatcctgccatttatgaagtagtggaaaaggag
cataatagacaagaaagtaatatagagcttatagcttctgaaaactttacatctaaagct
gttatggaggctatgggatcatttttaactaataaatatgctgaaggatatccaggaaaa
agatattatggtggatgtcatgaagttgatatagctgaaaatattgctaaagaaagaatg
cttcaattatttggtggggatcatgcaaatgtgcaaccacattcaggatctcaagcaaac
atggctgtatatttttcagtactacaacctggtgacgtagttttaggaatggatttaagt
aatggcggtcacttaactcatggatcaccagttaatttttcaggaagactttttgatttc
aagtcttatggtgtagatgataacggagttatagattatgaaaatgtaagaaccatagct
agagaagtaaagcctaagcttattgtagcaggtgcctctgcttatagtagaactattgat
tttgcaaagtttagagaaattgctgatgaagttggtgcaatgcttatggtagatatggct
catatcgcagggcttgtagcagctggtgttcatccaaatccagtaccttattgtgacttt
gtaacaactacaactcacaaaactttaagaggtccaagaggtggagctataatttgtaag
gaaaagtatgcgaaagtactagataaaaacatattcccaggaattcaaggtggaccattg
atgcatatcattgcaggtaaggcagtatgttttggagaagctttaaaagatgactttaag
gaatatggaaagaatatagtttcaaatgctaagactttagcagaagaacttatgaattat
ggatttaatgtagtttcaggtggaacagataatcatcttttattagtagatttaagaaat
aagggaattacaggtaaagaagcagaaaaacttcttgattcagtaagtatcacaactaat
aagaacacagtaccaaatgaaacagaaagtccatttgttacttcaggtataagaatagga
actgcagctgtaactacaagaggttttggtgaaaatgaaatgaaggaaatagctagattt
ataaacgatgctattgaaaatagagataaagatttatctgcattaaaggcagaagttaat
gcactttgtgcaaagttccctatttattag
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