Clostridium bornimense: CM240_2000
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Entry
CM240_2000 CDS
T03165
Symbol
aspS3
Name
(GenBank) Aspartate-tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
clt
Clostridium bornimense
Pathway
clt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CM240_2000 (aspS3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clt01007
]
CM240_2000 (aspS3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clt03016
]
CM240_2000 (aspS3)
03029 Mitochondrial biogenesis [BR:
clt03029
]
CM240_2000 (aspS3)
Enzymes [BR:
clt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CM240_2000 (aspS3)
Amino acid related enzymes [BR:
clt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CM240_2000 (aspS3)
Transfer RNA biogenesis [BR:
clt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CM240_2000 (aspS3)
Prokaryotic type
Other AARSs
CM240_2000 (aspS3)
Mitochondrial biogenesis [BR:
clt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CM240_2000 (aspS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
DUF4443
Motif
Other DBs
NCBI-ProteinID:
CDM69158
UniProt:
W6RXI7
LinkDB
All DBs
Position
rep1:complement(2197603..2199390)
Genome browser
AA seq
595 aa
AA seq
DB search
MAVSINGLKRTVMCGEVTEEYIGKRITVMGWVQRKRNLGSLVFIDLRDIKGILQAVFGEE
INKEAFAIADTLKSEYCVAITGEVVRRESPNNSMVTGQVELKGEEVVIFSESETPPIYIK
EDLDAAENIRLKYRYLDLRRPDMQKLFVIRHKTTSIIRNYLSDHGFLEMETPILTKSTPE
GARDYLVPSRNYNGQFYALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRANRQPEFTQ
VDMELSFVDMDDVMTLNEGLISKVFKEVLNVDVKTPFMRMPYKEAMDKYGSDKPDIRFGM
EINDITNIVSDMDFVVFKSNIEEGGFVKAINFEGGAALGRKQIDKLVDFAKDHKAKGLIW
IAYKEDGVKSSIAKFLSEEKANEIKEAMGAKDGDLVLIVSDAYKNAVESLGALRLHIAKE
FDLIKNKDEFKFLWVTEFPLLSYDEEEKRYVAEHHPFTMPMDEDLELLTTDPLKVRAKAY
DMVLNGEELGGGSIRIHDSKLQEKLFNTIGFSDEEAEEKFGFLLQAFKFGPPPHGGLAFG
LDRMIMFLGGTDNIKDVITFPKNQNAACPMTEAPGMVDEKQLKELGIKVIEKEDK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagtattaatgggttaaaaagaaccgtaatgtgcggggaagtaacagaagag
tatattggaaaaagaataacagtaatgggctgggttcaaagaaaaagaaatctaggttca
ttagtatttattgatttaagagatatcaaaggaatacttcaagctgtttttggtgaagaa
ataaataaggaagcttttgctatagcagatacattaaaaagtgagtattgtgttgctata
acaggagaagttgttagaagagagtcaccaaacaattcaatggttacagggcaagtagaa
cttaagggggaagaagttgttattttctctgaaagtgaaacacctcctatttatataaaa
gaagatttagatgcggcagaaaatataagattaaaatatagatatctagatcttagaaga
ccagatatgcaaaagttatttgtgataagacataaaactacttcaatcattagaaattat
cttagtgaccatgggttcttagaaatggaaacaccaatattaacaaaatctactccagaa
ggagctagagattatcttgttccaagtagaaattataatggacagttttatgcattacca
caatcaccacaattatttaagcaattattaatggtatctggctttgatagatattatcaa
attgctaaatgtttcagagatgaggatttaagagcaaatagacaaccagaatttactcaa
gtagatatggagttatcttttgtagatatggatgatgttatgactttaaatgaaggatta
atatcaaaagtgtttaaggaagtattaaatgttgatgttaagacaccatttatgagaatg
ccttataaagaagcaatggataagtacggaagtgataagccagatataagatttggtatg
gagataaatgatatcacaaatatagtttcagatatggattttgttgtatttaagagcaat
atagaagaaggtggttttgtaaaagctattaactttgaaggtggagcagctcttggaaga
aagcaaattgataagttggttgattttgccaaggatcataaagcaaaaggtcttatttgg
attgcatataaagaagatggggttaagtcatctatagctaaattcttaagtgaggaaaaa
gcaaatgaaataaaagaagctatgggagctaaagatggagatcttgttcttattgtttca
gatgcatataaaaatgctgttgaatcattaggtgcacttagacttcatattgctaaggaa
tttgacttaattaagaataaagatgaattcaaattcttatgggttacagaattcccacta
ttatcttatgatgaagaagaaaagagatatgtagcagaacatcatccattcacaatgcca
atggatgaagatttagaacttttaactactgatccattaaaagtaagagcgaaagcttac
gatatggttcttaatggtgaagagcttggtggaggatctataagaattcatgattcaaag
ctacaagaaaagttatttaatacaataggctttagtgatgaagaagcagaagaaaagttc
ggtttcttattacaagcatttaagtttggaccaccaccacatggaggattagcttttggt
ttagatagaatgattatgttcttaggtggaacagataacataaaagatgttataacattc
cctaaaaatcaaaacgctgcatgtcctatgacagaggcaccaggtatggtagatgaaaaa
caattaaaagaattaggaattaaagtaatagaaaaagaagataagtaa
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