KEGG   Clostridium bornimense: CM240_2144
Entry
CM240_2144        CDS       T03165                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
clt  Clostridium bornimense
Pathway
clt00300  Lysine biosynthesis
clt00470  D-Amino acid metabolism
clt01100  Metabolic pathways
clt01110  Biosynthesis of secondary metabolites
clt01120  Microbial metabolism in diverse environments
clt01230  Biosynthesis of amino acids
Module
clt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:clt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CM240_2144 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CM240_2144 (dapF)
Enzymes [BR:clt01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     CM240_2144 (dapF)
SSDB
Motif
Pfam: DAP_epimerase KH_Mug60-KHD4
Other DBs
NCBI-ProteinID: CDM69301
UniProt: W6RXA7
LinkDB
Position
rep1:complement(2371760..2372719)
AA seq 319 aa
MNFDIIKCHGACNDFALIDEINNNYNFTEEDRRKLAILLCDRNGAVGGDGIVFMSKSQNC
DGKMRIFNADGTEPEMCGNVLRNVGRFVMENFKKDEVTIETMKANYKVRKVKDIFNGVYT
DEIELKAISFNPTDLPLISEKDKVIFQPIPELSVKEKFTAIACPNPHLVVLTDEIKADEI
EEVGIKANSTKSVLPQGSNVNYLKVLDENTVYVKTYERGVGFTKACGTGMTASIVACTIA
HPEMKNKPIKIYNDGGMIINTVVENEEELKVIMVGNATFVYTATVKYEDNTISVSNKKEF
VEENESYDKFLEFTNAVEK
NT seq 960 nt   +upstreamnt  +downstreamnt
atgaattttgatattataaagtgtcatggtgcatgtaatgactttgcacttattgatgaa
ataaataataattataattttactgaagaggatagaagaaaactagctattttactttgt
gacagaaatggtgctgttggtggcgatggtattgtattcatgagcaaaagtcaaaactgt
gatggtaagatgagaatatttaatgctgatggtacagaaccagaaatgtgtggaaatgtt
ctaagaaatgttggaagatttgttatggaaaacttcaaaaaagatgaagttactatagaa
acaatgaaagctaattataaagttagaaaggtaaaggatatttttaatggagtatatact
gatgagatagaacttaaagctatttcatttaatccaactgatttaccattaatatctgaa
aaggacaaagtaatatttcaacctataccagaattatcagttaaagaaaaatttacagca
atagcatgtccaaatccacacttagtagtattaactgatgaaattaaagcagatgaaata
gaagaagtaggtataaaagctaactctacaaaatcagtattaccacaaggctctaacgta
aattatttaaaagtattagatgaaaatacggtatatgtaaaaacatatgaaagaggagta
ggatttacaaaagcttgtggtacaggaatgacggcctctatagttgcttgtactatagca
caccctgaaatgaaaaataaacctataaaaatatataatgatggtggaatgatcattaat
actgtagtagaaaatgaagaagaactaaaagtaataatggtaggaaatgcaacatttgtt
tatacagctacagtaaaatatgaagataatactatatcagtatcaaataaaaaagaattt
gtagaagaaaatgaaagctacgataaatttttagagtttactaacgctgttgagaaatag

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