Clostridium bornimense: CM240_2144
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Entry
CM240_2144 CDS
T03165
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
clt
Clostridium bornimense
Pathway
clt00300
Lysine biosynthesis
clt00470
D-Amino acid metabolism
clt01100
Metabolic pathways
clt01110
Biosynthesis of secondary metabolites
clt01120
Microbial metabolism in diverse environments
clt01230
Biosynthesis of amino acids
Module
clt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CM240_2144 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CM240_2144 (dapF)
Enzymes [BR:
clt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CM240_2144 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
KH_Mug60-KHD4
Motif
Other DBs
NCBI-ProteinID:
CDM69301
UniProt:
W6RXA7
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All DBs
Position
rep1:complement(2371760..2372719)
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AA seq
319 aa
AA seq
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MNFDIIKCHGACNDFALIDEINNNYNFTEEDRRKLAILLCDRNGAVGGDGIVFMSKSQNC
DGKMRIFNADGTEPEMCGNVLRNVGRFVMENFKKDEVTIETMKANYKVRKVKDIFNGVYT
DEIELKAISFNPTDLPLISEKDKVIFQPIPELSVKEKFTAIACPNPHLVVLTDEIKADEI
EEVGIKANSTKSVLPQGSNVNYLKVLDENTVYVKTYERGVGFTKACGTGMTASIVACTIA
HPEMKNKPIKIYNDGGMIINTVVENEEELKVIMVGNATFVYTATVKYEDNTISVSNKKEF
VEENESYDKFLEFTNAVEK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatattataaagtgtcatggtgcatgtaatgactttgcacttattgatgaa
ataaataataattataattttactgaagaggatagaagaaaactagctattttactttgt
gacagaaatggtgctgttggtggcgatggtattgtattcatgagcaaaagtcaaaactgt
gatggtaagatgagaatatttaatgctgatggtacagaaccagaaatgtgtggaaatgtt
ctaagaaatgttggaagatttgttatggaaaacttcaaaaaagatgaagttactatagaa
acaatgaaagctaattataaagttagaaaggtaaaggatatttttaatggagtatatact
gatgagatagaacttaaagctatttcatttaatccaactgatttaccattaatatctgaa
aaggacaaagtaatatttcaacctataccagaattatcagttaaagaaaaatttacagca
atagcatgtccaaatccacacttagtagtattaactgatgaaattaaagcagatgaaata
gaagaagtaggtataaaagctaactctacaaaatcagtattaccacaaggctctaacgta
aattatttaaaagtattagatgaaaatacggtatatgtaaaaacatatgaaagaggagta
ggatttacaaaagcttgtggtacaggaatgacggcctctatagttgcttgtactatagca
caccctgaaatgaaaaataaacctataaaaatatataatgatggtggaatgatcattaat
actgtagtagaaaatgaagaagaactaaaagtaataatggtaggaaatgcaacatttgtt
tatacagctacagtaaaatatgaagataatactatatcagtatcaaataaaaaagaattt
gtagaagaaaatgaaagctacgataaatttttagagtttactaacgctgttgagaaatag
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