Clostridium bornimense: CM240_2265
Help
Entry
CM240_2265 CDS
T03165
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
clt
Clostridium bornimense
Pathway
clt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CM240_2265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_2265
Enzymes [BR:
clt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CM240_2265
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CM240_2265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
Helicase_RecD
nSTAND3
DNA_pol_lambd_f
SLFN-g3_helicase
DEAD
UvrD_C
PhoH
AAA_12
AAA_22
NTPase_1
Herpes_Helicase
AAA_28
MeaB
TraI_hel_assoc_N
HerA_C
UvrD-helicase
AAA_29
Thymidylate_kin
ABC_tran
SRP54
AAA_16
AAA
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CDM69407
UniProt:
W6S520
LinkDB
All DBs
Position
rep1:complement(2478893..2481109)
Genome browser
AA seq
738 aa
AA seq
DB search
MVTIEGVIETITFKNDENGYVIGKVKDNSDKLITFVGIVPFATEGLHVKIEGEWTVHPKF
GEQLKVSNIEEVLPTSIIGIERYLSSGIITGIGPVTAKKIVEKFGEDTLTILDENIDRLR
EIEGVGEKKLNTIKNSYEKGRGVRKINIFLQTYGITPTQCAKIYKKYGEESIEIVKENPY
KLTEDISGIGFKSADKIARSLGIEASSPFRIKSGIIYVLNNYCALGNSCMPIDLLISQGE
EILLVSADDIEKNLMEISLDLKVKIEEIDHKVYVYPLTIYYSELSVTHKLITLSTSDYNK
LDIDVDKEIKEFEDENDISLQEIQKEAVKGIFNTGVEVITGGPGTGKTTIINCITTIFED
NGYKVFMAAPTGRAAKRITESTGREAKTIHRLLEMGVSEDEGIGFNRGEEKPLQCDVLIV
DEASMIDIILMSSLLKSISIGTRVVIVGDSDQLPSVGPGNVLRDIIDSDVVKVVKLKEIF
RQGKESMIVTNAHKINSGEMPILNVKNNDFFFINKNGDSVVLNEILGLIDKRLVKFNTKW
NKLKDIQVLTPMKKGNLGSINLNKEIQNVLNPHHPMKKEIEYRNNFFRIGDKVMQTKNNY
SIKWERIKGFGDPTGEGVFNGDVGYIKDIDEENNKISVVFDEEKLVKYEEMYFDELELSY
AMTIHKSQGSEFPVVILPVFMGNNMLMNRNLLYTAITRAKQLVVIVGNQKSLAFMVSNTK
TSERYSTLDFRIKDILKE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggtaactattgagggtgttattgaaactataacttttaaaaatgatgaaaatggatat
gtaattggtaaggtaaaggataatagtgataaattaataacatttgttgggatagtacca
tttgcaactgaggggttacatgtaaagattgaaggagagtggacagtacatcctaaattt
ggagagcagttgaaagttagtaatatagaagaggttttacctacatctataataggaata
gaaagatacttatcttcaggaataattactggaataggtccagttacagcaaagaagatt
gttgagaaatttggggaagatacattaactatattagatgaaaatattgatagattacga
gaaatagaaggtgttggagagaagaagctaaatactataaaaaattcttatgaaaaaggt
agaggtgtaagaaaaataaatattttcttgcagacttatggaataactccaactcaatgc
gcaaaaatttataaaaaatatggagaagaatcaatagaaatagttaaggaaaatccatat
aagttaacggaagatataagtggaataggttttaaaagtgccgataaaatagcaagaagt
ttaggaatagaagctagttctccatttagaattaagtctggaattatatatgtattaaat
aattattgtgccttaggtaattcctgcatgcctatagatttacttattagccaaggtgaa
gagatattacttgtatctgcagatgatattgaaaaaaatttaatggagattagtcttgac
ttaaaggtaaagattgaggagatagatcataaagtatatgtttatccattaacaatatac
tatagtgaattatcagttactcataaattaataactttatctacatcggattacaataaa
ttagatatagatgttgataaagaaataaaagagtttgaagatgaaaatgatatatcactt
caagaaatacaaaaagaagctgtaaaaggtatttttaatactggagtagaggtaataaca
ggaggaccggggactggtaagactacaattataaattgtattacaacaatctttgaagat
aacggttataaggtgtttatggcggcaccgacaggaagagcagcaaagagaataacagaa
tcaactggaagagaggctaaaactatccatagactattagaaatgggagtctcagaggat
gaaggaatcggttttaatagaggtgaagagaaaccattacaatgtgatgtattaatcgta
gatgaggcatcaatgattgatattattttaatgagttctcttttaaaatctatatctatt
ggaacgagagtagttatagttggagattcagatcaattaccatcagtaggtccaggaaat
gtattaagggacattatcgattcggatgttgttaaggtagtgaagttaaaagaaatattt
aggcaaggaaaagagagcatgatagttacaaatgctcataaaataaattctggagaaatg
ccaatattaaatgtaaaaaataatgattttttctttataaataaaaatggagactccgta
gtattaaatgaaatattaggattaatagataaaagacttgttaagtttaatactaaatgg
aataagctaaaagatatacaagtgcttactcctatgaaaaaaggaaatttagggtctata
aatttaaacaaggagatacagaatgtacttaatccgcatcatcctatgaaaaaagaaatt
gaatatagaaataacttttttagaataggtgataaggttatgcaaacaaagaacaattac
tctataaagtgggaaaggataaagggattcggtgatcctactggtgagggtgtatttaat
ggagatgttggatatataaaagatatagatgaggaaaataataaaatttctgtagtgttt
gatgaagaaaaactagttaagtatgaagaaatgtactttgatgaattagagttatcttat
gcaatgacgatacataagagccaaggaagtgaatttcccgttgttattttgccagtattc
atgggtaataatatgcttatgaatagaaatcttttatatacagctataactagagcaaag
caattagtagttatagtaggaaaccaaaagtcacttgcatttatggtatcaaatacaaag
acttctgagagatattctactttagattttagaataaaagatatacttaaggagtag
DBGET
integrated database retrieval system
