Clostridium bornimense: CM240_2800
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Entry
CM240_2800 CDS
T03165
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clt
Clostridium bornimense
Pathway
clt00260
Glycine, serine and threonine metabolism
clt00460
Cyanoamino acid metabolism
clt00630
Glyoxylate and dicarboxylate metabolism
clt00670
One carbon pool by folate
clt00680
Methane metabolism
clt01100
Metabolic pathways
clt01110
Biosynthesis of secondary metabolites
clt01120
Microbial metabolism in diverse environments
clt01200
Carbon metabolism
clt01230
Biosynthesis of amino acids
clt01240
Biosynthesis of cofactors
clt04981
Folate transport and metabolism
Module
clt_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CM240_2800 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CM240_2800 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CM240_2800 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CM240_2800 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CM240_2800 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CM240_2800 (glyA)
Enzymes [BR:
clt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CM240_2800 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CDM69917
UniProt:
W6S6C8
LinkDB
All DBs
Position
rep2:107644..108888
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AA seq
414 aa
AA seq
DB search
MINEIMESISKCDPEVGEALKKEMKRQRRNLELIASENIISPTVMMAMATVPANKYAEGY
PGKRYYGGCEEIDVIEQLAIDRTKELFGCEHACVQPHSGANANMAVYAAFLKPGDTVLGL
NLAHGGHLTHGSPVNQSGILYNFIPYNIDENSGVIDYDKVRELAIRHKPKMIVAGASAYP
REIKFDVFHDIAKEVGAILFVDMAHIAGLVAAGLHQSPVPYADIVTTTTHKTLRGPRGGI
IMCKEKYAKAINKAIFPGTQGGPLMHVIAAKAVCLGEALKPEFKVYQQQVIKNAKALADA
LIDEGFNLISGGTDNHLMLVDLRNMNITGKELQNRLDEVYITLNKNAVPNDPESPFVTSG
VRIGTPAVTTRGLVEEDMKVIAKLIKLTITDFDTKADYIRSEVTKICDKYPLYQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgaaattatggaatcgatttctaaatgcgatccagaggttggggaagctcta
aaaaaagagatgaaaaggcaaagaaggaatttagaactaattgcttctgaaaatattatt
tcaccaactgtaatgatggcaatggcaactgtaccagctaataaatatgctgaaggctat
ccaggaaagagatattatggtggatgtgaggaaatagatgtaattgaacagttagctatt
gatagaactaaggagttatttggatgtgaacatgcgtgtgtacaaccacattcaggggct
aatgccaatatggctgtgtatgcagcattcttaaaaccaggagatactgtattaggatta
aatttagctcatggtggacatttaacacatggaagtccagttaatcaatctggcatttta
tataattttattccttataatattgatgaaaattctggtgttattgattatgacaaagta
agagaacttgccataagacataaacctaagatgatagttgcaggtgcttctgcatatcca
agagaaattaagtttgatgtatttcacgatattgcaaaagaagttggagcaatattattt
gtagatatggcacatattgcaggtttagttgctgcaggattacatcaaagtccagtacca
tatgcagatatagttacaactacaacacataaaacattaagagggccaagaggcggaata
ataatgtgtaaggagaaatatgcaaaggcaattaataaagctatcttcccaggaactcaa
ggtggaccattaatgcatgttatagcagcaaaagcagtttgtcttggagaggcattaaaa
ccagaatttaaagtatatcaacaacaagtaataaaaaatgctaaagctcttgcagatgca
ttaattgatgagggattcaatttaataagtggtggaacagataatcatttgatgttagtt
gatttaagaaatatgaatataacaggtaaggaacttcaaaatagattagatgaagtatat
ataacattaaataaaaatgcagttcctaatgatcctgaaagtccatttgtaactagtggt
gttcgtataggaactccagctgtaacaacaaggggattagtagaagaagatatgaaagtt
atcgcgaaattaattaaattaactataactgattttgatacaaaagctgattatataaga
agcgaagtaacaaaaatatgtgataagtatccattataccaataa
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