Clostridium bornimense: CM240_2931
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Entry
CM240_2931 CDS
T03165
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
clt
Clostridium bornimense
Pathway
clt03030
DNA replication
clt03430
Mismatch repair
clt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CM240_2931
03430 Mismatch repair
CM240_2931
03440 Homologous recombination
CM240_2931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clt03032
]
CM240_2931
03400 DNA repair and recombination proteins [BR:
clt03400
]
CM240_2931
Enzymes [BR:
clt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CM240_2931
DNA replication proteins [BR:
clt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CM240_2931
DNA repair and recombination proteins [BR:
clt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CM240_2931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
PTCB-BRCT
DUF1678
Motif
Other DBs
NCBI-ProteinID:
CDM70048
UniProt:
W6S002
LinkDB
All DBs
Position
rep2:240636..241553
Genome browser
AA seq
305 aa
AA seq
DB search
MNFIAIDFETANEKRNSPCSIGIIVVKNGNVVEKIHHLIRPKEMRFMPINIGIHGIRPAM
VENELEFDKVWDKVKHHFNNNLVVAHNASFDISVLRNTLDLYGIEAPEFNYICTMKLARN
FYRDLDNAKLNTVNNFLGYEFKHHDALDDALACSNILLNISNELEIKDINEISRLLGVTI
GTVNNSGYTPSSTKGRVYRTSCREEVRSCRNILDNFKPGAFENEVVVFTGKLSSMDRSDA
MILVRRLGGTVGTSVTKKTTILVTNIKDIENLRRNEMSNKLRKAVDLKEKGQSIKIIDEL
EFLNY
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatcgcaatagattttgaaacagcaaatgaaaaaagaaatagtccatgttct
ataggtattatagttgtaaagaacggaaatgtcgttgaaaaaatacatcatttaataaga
ccaaaggaaatgaggtttatgccaataaatattggtatacatggtataagacctgctatg
gttgaaaatgaattagaattcgataaagtgtgggataaagttaagcatcactttaataat
aacttagtagtagctcacaatgcttcttttgatatttctgtacttagaaatacattagat
ctatatggaatagaagctccggagttcaattatatttgtacaatgaagcttgctagaaac
ttctatagagatcttgataatgcaaaattaaatacagtaaataactttttaggatatgaa
tttaagcaccatgatgctttagatgatgcactggcttgtagcaatatattattaaatatt
agtaatgaattagagataaaagatattaatgaaatatcaagattactaggtgttacgata
ggtactgttaataattcaggatatacgccttcttctactaagggaagagtttatagaact
tcttgcagagaagaagtgagaagttgcagaaatattctagataactttaagccaggggct
tttgaaaatgaggtagttgtttttactggtaaattatcaagtatggatagatctgatgca
atgattttagtaagaaggttaggagggacagtaggaacttctgtaactaaaaaaactact
attcttgttacaaatataaaggatatagaaaatttaagaagaaatgaaatgagtaataag
cttagaaaagctgttgatcttaaagaaaagggacaaagtattaaaataattgacgagtta
gaatttttaaattattaa
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