Clostridium bornimense: CM240_3064
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Entry
CM240_3064 CDS
T03165
Name
(GenBank) penicillin-binding protein transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
clt
Clostridium bornimense
Pathway
clt00550
Peptidoglycan biosynthesis
clt01100
Metabolic pathways
clt01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CM240_3064
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CM240_3064
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clt01011
]
CM240_3064
Enzymes [BR:
clt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CM240_3064
Peptidoglycan biosynthesis and degradation proteins [BR:
clt01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CM240_3064
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Gluconate_2-dh3
PQQ
Motif
Other DBs
NCBI-ProteinID:
CDM70181
UniProt:
W6RZU4
LinkDB
All DBs
Position
rep2:complement(391174..393930)
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AA seq
918 aa
AA seq
DB search
MKNSYRIRNDNYGHKFRKSITRYGALKISVIIICGYIGFGLINLQVRNHTYYSESAKSGS
HRLVEEQAPRGNIISKDGEILAYDKQMFALTFTEAEESTDKFYETMEKVIKILKENNLDI
DDDFPIKLNGDNYEFQFNAVDEEGRKLQERQFKIDISLMDSLSQKKYQKDYSKLNDKETK
KIIKEAEKYTAKDTYDFLTSKDMYDVPTGVYSKEDERRMVVVKYAIKLQSYSGYKPVTIA
SSLDRDVAFVFEQQLESMPGINIETKPQRCYPFNKIGAAFIGYVSKVNDDEKNEEKGYDA
STDIKGSSGIEEAFEDRLRGSKGATIVEVNRFGRPISELAKRESYQGQNVHLTVDWKVQQ
AAEKALEENMKKPRYNTTTHKSTQPDRGAVVALNAKTGEVIAMVSQPTFDPNDFAEVNGL
STEKYNEYYGFTNEFYENFVKEKGWSGKTIVTSDPSNSLNGKTYLDGLFPMNENGQREDL
KDMIAKPMVNYATQSLIPPGSTFKTFTAYAGLNEGVINETNTIKDAGFYDDGDGFNRPFP
EDGYLGNMNITSALAKSSNAYFMETSKRLYTKYKDVEKTKSSDEFKINYTENGIAAYAWR
FGIGADPEDDNAITSTGIEISENFGQVYNHYSAAESQAPLIYINIVNRLKEGKYTEGKYS
YTYPYFNLSLQSDDLSEEVKKLRQEARDVILGQIKTGNFDEDVLIKLFKKINANDPLYKG
RTISNSEYTSLMDFMKGQIISNGYTQITAKFNSYNAAIGQGLTNVTPLELASAYATYANG
GTRYKVHLLDKITDADGNVVFEQQPEILDEVDLDKSIMKTINEGLKQVISGNAELNSIFS
NLGVTVAGKTGTATFDNDQASYDREAYGWLATFAPADDPEIVVVSVVFNGHFGKENGSIN
YAVMDAYFNGNKNDGEGN
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatagttatagaataagaaatgataattatggacacaaattcagaaaatctata
acacgatatggagcattaaaaatttctgtaataataatatgtggatatataggatttgga
cttataaatctacaagttagaaatcacacatattatagcgaaagtgctaaaagtggttct
catagattagtagaggaacaagccccaagaggcaatattatttcaaaagatggtgaaata
ttagcttatgacaagcaaatgttcgctctcacttttacagaagcagaagaaagtacagat
aaattctatgagactatggaaaaggttataaagatattaaaagaaaacaatttagacata
gatgacgattttcctataaaacttaatggagacaattatgaatttcaatttaatgctgtt
gatgaagaaggacgtaaacttcaagaaagacaattcaaaattgatataagtttgatggat
tccttatcacaaaaaaagtatcaaaaagattattcaaaattgaatgataaagaaacaaaa
aagattataaaagaagctgaaaaatatacagcaaaagatacatatgattttttaacgtca
aaagatatgtatgatgtaccgacaggggtatattcaaaagaagatgaaagaagaatggtc
gtagtaaagtatgcaataaagttgcaaagttattcaggatataagccagttacaattgca
tcaagtttagatagggatgttgcatttgtatttgaacagcaattagaatctatgcctggt
ataaatattgaaacaaaaccccaaagatgttatccatttaataaaataggagcagcattt
attggttatgtttcaaaagtaaatgatgacgaaaaaaatgaagaaaaaggatatgatgca
agtactgacataaaaggttcatctggtatagaagaagcttttgaagatagacttagaggt
tctaaaggtgcaacgattgtagaagtaaataggtttggtagacctatatcggagttagct
aaaagagaatcctatcaaggtcaaaatgttcatttaacagtggactggaaagttcaacaa
gcagctgaaaaggctttagaagagaatatgaaaaagccaagatacaatacaactactcat
aagagtactcaaccggatagaggtgctgtagtagcacttaatgcaaagactggagaagtt
attgccatggtatctcagccaacttttgatcctaatgattttgctgaagtaaatggatta
agtacggagaaatataatgagtattatggctttactaatgaattctatgaaaattttgta
aaggaaaaaggatggtcaggaaaaactatagttactagtgaccctagtaacagcttgaat
ggtaagacatatcttgatggactttttcctatgaatgaaaatggacaaagagaagattta
aaagacatgattgcaaaaccaatggttaattatgcaacacaatctttaatacctcctggg
tcaacttttaagacttttactgcttatgctggtttgaatgaaggagtaattaatgaaact
aatactataaaagatgcaggtttttatgatgatggagatggatttaataggccattccct
gaagatggatatctagggaatatgaatattaccagtgctttagctaaatcttctaatgct
tattttatggaaacttcaaaacgtctttatacaaaatataaggatgtagaaaaaactaaa
agtagcgatgaatttaagattaattataccgaaaatggtatcgctgcttatgcatggaga
tttggaattggagcagatcctgaagatgataatgctattacttcaactggtattgagata
agtgaaaactttggccaagtatataaccattattctgctgcagaaagtcaagcaccgctt
atttatatcaacatagtaaataggctaaaagaaggaaaatatactgaaggaaaatatagc
tatacatatccatattttaatttatcgcttcaatcagatgatttaagtgaagaagttaaa
aaattaagacaagaggctagggatgttatacttggacaaattaaaaccggaaactttgat
gaagatgttttaattaaactatttaaaaagataaatgctaatgatcctctatataaagga
agaactatatctaactctgagtatacatctttgatggattttatgaagggacaaattatt
tcaaatggatatacccaaataacagcaaaatttaactcatataacgctgcgattggacaa
ggtcttacaaatgtaacacctttggaattagcatcagcttatgctacttatgccaatggc
ggaacaagatataaagttcatttacttgataagataacagatgctgatggaaatgtggta
tttgaacaacaaccagaaattttggatgaagttgatcttgataaatcgattatgaaaaca
ataaatgaaggacttaaacaggttattagtggaaatgctgaattaaattcaatattcagt
aacttaggagtaactgttgctggtaaaacaggtacagctacttttgacaatgatcaagca
agttatgatagagaagcatatggatggttagcaacttttgcacctgcagatgatcctgaa
atagttgtagtatctgttgtatttaatggtcactttggtaaagaaaatggatcaattaac
tatgctgttatggatgcatattttaatgggaataaaaacgatggagaaggaaactag
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