Clostridium bornimense: CM240_3243
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Entry
CM240_3243 CDS
T03165
Symbol
rodA
Name
(GenBank) rod shape-determining protein rodA
KO
K05837
peptidoglycan glycosyltransferase [EC:
2.4.99.28
]
Organism
clt
Clostridium bornimense
Pathway
clt00550
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CM240_3243 (rodA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clt01003
]
CM240_3243 (rodA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clt01011
]
CM240_3243 (rodA)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clt03036
]
CM240_3243 (rodA)
Enzymes [BR:
clt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CM240_3243 (rodA)
Glycosyltransferases [BR:
clt01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CM240_3243 (rodA)
Peptidoglycan biosynthesis and degradation proteins [BR:
clt01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase
CM240_3243 (rodA)
Chromosome and associated proteins [BR:
clt03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CM240_3243 (rodA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FTSW_RODA_SPOVE
COA2
Motif
Other DBs
NCBI-ProteinID:
CDM70360
UniProt:
W6SKG4
LinkDB
All DBs
Position
rep2:complement(560424..561584)
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AA seq
386 aa
AA seq
DB search
MKQNYKIGKILSNLKINKKLISELDFTTLMIAVAIVIFGVLNIYSATYNKTLDGVLIGFR
YSKLQLMWLVIGLIVVYCILTIDYSFFKNYAYVIYGTSIILLLINKFIGTESKGAQSWIK
IGSFAIQPSEFAKLAIIIIVAKKIEDMGGKIDSFKKLLIIFIYAIIPTSLVIIQPDMGMS
MVIFFTVLGMVIVGKLDWKIIGGGFLLLFISIAVVWNSGLIQPYQKERIMTFIDPSRDPL
GKGYHVIQSKIAIGSGGFTGSGYKNGSQTKGGFIPEAWTDFIFSVVGEEWGFIGSFGLLM
LYGIMIFRMINIAKESKDVFGSILVAGVTGSMLFSILENMGMSIGLMPITGITLPFMSYG
GSSMLVYFMSLALVLNVGMRHKKINF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaattataaaattgggaaaatattgtcaaatctaaaaataaataaaaagcta
ataagtgaactagattttacaacacttatgatagcagttgcaattgttatttttggagta
cttaatatttattcagctacatacaataaaactttagatggtgtgcttatcggttttaga
tactcaaaattacaacttatgtggctcgtaatagggctaattgtagtatattgtatccta
actatcgattattctttctttaaaaactatgcatatgtgatttatggaacatctattata
ttattattgataaataaatttataggtacggagagtaaaggggcacaatcatggataaag
ataggctcttttgcaatacagccttcagaatttgcaaaattagctataataattatcgtt
gcgaagaaaatagaagatatgggtggaaaaatagattcatttaaaaagctattaattatt
tttatttatgctattataccaacatctttagttataatacaaccagatatgggtatgagt
atggtaattttctttacagtactgggtatggtaatagtaggtaaacttgattggaagatt
attggtggaggatttttacttttgtttatttcaattgcagtagtatggaatagtggttta
attcaaccatatcaaaaagaacgtattatgacttttatagatccttcaagagatccttta
ggaaagggatatcatgtgatacaatctaaaattgctataggatctggtggatttactgga
agtggatataaaaatggaagtcaaacaaaaggtggatttatcccagaagcatggactgat
tttattttctcagtagttggcgaagaatggggatttattggctcttttggtcttttgatg
ctgtatggaattatgatttttagaatgattaatatagctaaggaatcaaaagatgttttt
ggatcaatacttgtagctggggttacaggatcgatgttattctcaattttagagaatatg
ggtatgagtattggattaatgccgataacagggataacactaccttttatgagttatgga
ggtagttctatgcttgtatattttatgagtttagcacttgttttaaatgttggtatgaga
cataaaaaaattaatttttag
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