Clavispora lusitaniae ATCC 42720: CLUG_00052
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Entry
CLUG_00052 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K18720
nucleoporin NUP145
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUG_00052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_00052
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLUG_00052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
8500623
NCBI-ProteinID:
XP_002618893
UniProt:
C4XVN3
LinkDB
All DBs
AA seq
1411 aa
AA seq
DB search
MSAGTSWGNSTGFGANTSNSGGAQPISGGLFGNSSSAFPTFGAKSQGASLPANTQQNANT
GLFGNSSNNASTTLPGSTSSGLFGSSANNTSNNGGLFGNTGSKPTGGLFGNTNSSSAAAG
GGLFGNTNSSSSTTGGGLFGTSASNPTSNTGTSNTSGGLFGNSNKPATGGLFGSSNSTAN
TGGLFGHPNTTATGNSNSTAAGGLFGNSNSTATTGGLFGASTNPLNKPSTGGLFGSSNTG
GMFGASGNTGGLFGASNTSNTNAQGPNIASTAYTPNPYSSDSILSSINATENNMPLSITG
SLFAKPSSIQHRQSASQPPKKTYQSSLLKRLAQTFKIFRSTPDSSIEDLGKSHLKGIFTQ
QNFVGGYSNSNVDTSSYSVSKNHKKTSTLPVANVSVGDVKKLVIKSKPLKFHLINADKVF
NAKKRCILVSSINGGLTTHQNPEESDLEDTEFVEEEHRKVAKNVSKIQVEAEEAEKSESD
DMDTNNGYWCSPSLAYLSKLSPSELSHVENFIVGRLNVGQIAYNFPVDLAGLFASCAERD
VPVSQELFGKIIKIDGSIVKVYSEEEEMNCKPGIGFELNVPATITIKAPPKKNISDQDHI
RRLQNLTGMEFVTYNPLTHYWTFKVKHFSIWGLIDDGEDDDMVTDDAKKLLALKKKQDDQ
EPEASATYSQIYENEAYQRELKRQRIGNYTSGLPGAWDHTANSVAGGSLGVKQELVQNEI
DRELREYKQDKSTDAWAMNLSDITSEGDESEDAKSLNSIALQNPLYPEEAKNYDYLKQIV
SVMPPNTDMEEIVNERAYEPEVSNEEDFDQFGVQSSLPTSKDWLLQLELANDIDSALNPY
LAIPYKKQSALSTVKDIVFSDVEKSKESKNNSRKPLKDESNLISEVSSTAYDNSAVTKLV
QKLLVRSTVSKRENSFPRLQLDKSLDFRAISFLNGHDTDSQLIELASILFDEVDISSNSK
YQAVDLSNKSIKHRLETLEQRNSFISWLKKYKLGSSSEFQGDSLDIIYDTICRGNLKSAV
ELAISSHNTHLAALLTLLDSNDQAVKKIAQSQIEDWKVTGAIEFIPAPIIKIHKILAGAF
DEVSQDIPYHVAIALRLLYGNPVANLSSVLSSVNCEDISDDFTTIIDIYSKFNYDGFKEA
TAQIEKSELSDKVKWLSLQVLSNKTGNLDSSSNDSVSNSFAKSLEESGLWKEAIFVYSSV
HDDSSVEQSIRRVVISNINEIKNDERDNEEFSVSVLGVPRSLIHEAIAIEKSKNGDYWGQ
VEALVEAQLWEKAHVVICKELGPETVISNSESGKSRLQALADMFPEKGAIIPEWNQGAGL
YVKYFESIDAFERHSDIATDDLNFLLCNLALVQVDSFMSQVALKIMTKKVGDVTLDHKQQ
VPDVKRKIHALIMGENERNYFESRLQGLNIR
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctggaactagttggggaaactcgacaggctttggtgccaatacttcgaattct
ggtggtgcgcaaccaatttcaggtggactctttggaaactcctcctctgcatttccaacc
tttggcgccaaatcacagggagcatctctaccagcaaatacacaacagaatgccaatact
ggcttgtttgggaactcttcgaataatgcactgacaacattgcccggtctgacctcttct
ggcttatttggctcctcggcgaataatactagcaacaatggtggtttgtttggcaatacg
ggatctaagcctacaggagggttatttgggaacacaaattcatcgtctgctgcggcaggt
ggtggtttgtttgggaacacgaattcgtcttcttccacaacaggcggtggtttgtttgga
acaagtgcctcgaatccaacttccaacacaggaacttcaaatacctcaggtggcttattt
ggcaacagtaacaagccagcaaccggtggcttgtttggaagctccaactctactgcaaat
actggcggtttatttggtcaccctaatactactgccactggcaactcgaactctactgcg
gcaggaggattatttggaaactctaattctacggcaactacaggaggactttttggagct
tccacgaacccgttgaataaaccttcgacgggcggattgtttggctcttctaatactggt
ggcatgttcggtgcatctggtaatacaggaggattatttggtgcatccaatacttcaaac
acaaacgcccaaggcccaaacatcgcatctacagcatataccccaaacccctacagttct
gactccattctttcctcgatcaatgctactgagaataatatgccattgtccatcacaggg
tcgttgttcgcaaagccttcgtcgatacaacacaggcaaagtgcactgcagcctccaaag
aaaacctatcaactgtcattgctcaaaagattggcacagacatttaagatttttcggtca
actccagactcttcaattgaagacttgggtaaatctcacttgaaggggattttcactcaa
cagaactttgttgggggttattcgaatagcaacgtcgatacttcttcgtacagcgtttct
aagaatcacaagaaaacctctactcttcctgtggccaatgtcagtgttggagatgtcaag
aaacttgtcatcaaatccaagcccctcaagttccatttaatcaacgcagacaaagttttc
aatgccaagaagagatgtatacttgttctgtcgataaacgggggtcttactacacatcag
aatcccgaggaaagtgacttagaagacacagaatttgtagaagaagaacatagaaaggtg
gccaaaaatgtctctaagattcaagttgaagccgaagaagccgagaagtcggaactggat
gatatggatactaacaatggctattggtgttccccctctcttgcttacctcagcaagctt
tctcctagtgaattatctcacgttgagaactttattgtgggaagacttaatgttggtcaa
attgcatacaactttcctgtggatttggcggggttatttgctctgtgcgctgagagagat
gttccagtttctcaagaactatttggaaagattatcaaaattgatggctctatcgtgaag
gtctactccgaggaagaagaaatgaactgtaaaccagggataggttttgaacttaatgtt
cctgctacaattaccataaaagctcctcctaagaagaacatttctgatcaagatcacatc
aggcgcttgcaaaacctcacaggaatggaatttgtcacatataacccactaacacattat
tggactttcaaagtcaagcatttcagtatttggggcttgattgatgatggtgaggatgat
gatatggtaacagatgatgccaaaaagttgcttgctctcaagaaaaaacaggacgatcaa
gagcctgaagcatcggcaacctattcccaaatctacgagaatgaagcgtaccaaagagag
ttaaagagacaaagaattggtaattatacgtccggacttcctggagcatgggaccataca
gcaaatctggtggcaggaggtctgcttggtgttaagcaggaattggtacagaatgaaatc
gatcgtgagcttcgcgagtacaaacaagacaaatctacagatgcatgggcaatgaactta
agtgatatcacgagtgaaggtgatgaatcagaagatgcaaaatctctcaatagtattgcg
cttcaaaacccactttatccagaggaagcaaagaactatgattatctcaagcagatagtt
agtgtgatgcctcctaacactgatatggaagaaattgtcaatgagagggcatatgaacct
gaggtgtcaaatgaagaagattttgaccagtttggtgtgcaatcttccctaccaacttcc
aaggattggcttcttcaattagaacttgctaatgatattgactcagctttaaacccttat
cttgccattccttacaagaagcaactggcgttaagcactgttaaggacattgtgttttca
gatgttgaaaagagcaaagaaagcaaaaataattcacgtaaacctctcaaggatgaaagc
aacttgatatcagaagtttcgtcaactgcttacgataattctgctgtcaccaaactagtt
caaaagttgctcgtgagaagcactgtttccaagcgagaaaattcattccctcgcttgcaa
ctcgacaaatccttggatttccgtgctatatctttcctaaatggccatgacacagattcg
cagcttattgagcttgcatcaatcttgtttgatgaggttgatatttcatcaaactctaag
taccaagctgttgatctttctaacaaatcaattaagcaccgactcgagactcttgagcaa
cgcaactctttcattagctggctcaaaaaatacaagcttggctcttcctcggaatttcag
ggcgactcgctcgacattatttacgatactatttgccgaggcaacctcaaatctgccgtt
gaattagcaatttcatcacataacacgcatttggcagcattattgacacttttggactcg
aatgatcaagctgtcaaaaaaattgctcaaagtcaaattgaggactggaaggtaacaggt
gctatcgaatttattccagcgccaatcatcaaaattcataaaatcctagcaggtgcgttc
gatgaagtttctcaggacattccgtaccatgtcgctatcgctttgaggttactatacggc
aaccctgttgctaacctactgagtgtcctttcatcagtgaactgcgaggatatttctgac
gatttcactaccattatcgatatttactctaaattcaactacgatgggtttaaagaagca
actgcgcaaattgaaaaatctgaattgagtgacaaggtgaaatggctttctttgcaggta
ttgtctaataagacgggcaaccttgactcttctagtaacgattcagtttctaatctgttt
gcaaaatctttagaggagtcaggactttggaaggaggcaatcttcgtgtactcctcagtt
cacgacgatagttctgttgagcagctgattcgaagagttgttatttctaatatcaacgaa
attaagaacgatgaaagagataacgaggaattttccgtcagtgtgcttggcgttcctaga
agcttgatacatgaggcaattgctattgagaagtcgaagaacggagattattggggtcag
gtggaggctttggtcgaggcacaactctgggaaaaagcacatgttgttatttgcaaggag
ctcggtccagaaactgtcattagcaacagtgagctgggaaagagcagattgcaagcactt
gctgatatgtttcctgagaagggggccattattcccgagtggaatcaaggggcaggcttg
tatgtcaaatactttgaatccattgatgcattcgaacgccatagtgacatcgctacagat
gacttgaactttctactttgcaatttggcgcttgttcaggttgattctttcatgagtcaa
gttgccttgaagatcatgacaaagaaagtcggtgatgtgacacttgaccacaagcagcag
gttcctgacgtcaagcgtaagatccatgccctcattatgggagagaacgagagaaattat
tttgaaagccggttacaaggtttgaacatcagatag
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integrated database retrieval system