Clavispora lusitaniae ATCC 42720: CLUG_00185
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Entry
CLUG_00185 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
clu
Clavispora lusitaniae ATCC 42720
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clu03009
]
CLUG_00185
Ribosome biogenesis [BR:
clu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
CLUG_00185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
NBCH_WD40
WDR54
WD40_RFWD3
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
8500345
NCBI-ProteinID:
XP_002619026
UniProt:
C4XW62
LinkDB
All DBs
AA seq
446 aa
AA seq
DB search
MEEAVFYIQGLPEKKSEPLASATSIHSGQHVASFRAGAPRHGAALSGIGPNERLFVAGAS
AIIFSYLWGKESVDQRFPVPEQMACLAVANHPETVSDKTNVTSPSSSPLSAPACPWLLAA
GAPSGRLYVWELASGRLLCVKDAHYQALTMIQFSRCGTFAVTAGEDARVSVWRTSDLVTG
TAAPFATFADHTLAVTDICVDSGSLSVVSASRDGTVRVYDIMSKTLRSTFVFSQPVSSVA
RDPAGRALYAALADGTIRQVQMYTVNPHTHMMEAVGSGIVTVPADPELAYTFVHHGSAEV
TSLAMSMDGINLVSGDSEGRVFVTDVVTKQVVRAFTAGASVSHLEVGVFSREKKAAPARM
LIPLKRVVAAQDPLEHSVAVQIRADEHGSAAAKSAPDFAAWLEEKAHQQWEFAQEAPEQQ
KLQKLSAAYNALKENYEKLLAGKEEN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcagttttctacatccagggtttgcctgagaaaaaaagcgagccgctagct
tctgccacatctattcacagcggacagcacgttgcgctgtttcgggcgggcgctccaaga
cacggagctgctctttcaggtataggtccaaacgagcgtcttttcgtggccggcgccagc
gccatcatcttttcgtatttgtggggaaaggagagcgtggaccagcggttccctgttcct
gaacagatggcttgtcttgcggtggcaaaccatccagaaactgtctctgacaaaaccaat
gtgacttctccatcctcatcgccattgtctgcgccagcctgtccctggcttcttgcggcc
ggtgctccatcaggccgcttgtacgtgtgggagcttgcgtcgggccgccttctatgtgtg
aaggatgcccattaccaggcgctcacgatgatccagttttctcgttgcggcacgtttgcg
gtgacagcaggagaagatgcgcgggttctggtgtggcggacaagcgacttggttacaggc
acagcggcgccgtttgctacttttgccgaccacacattggcggtgacggatatttgcgtc
gactcgggctctctttctgtcgtgtcggcctcgcgcgacggcacagtgcgggtgtacgat
attatgagcaaaacgctccggtcgacgtttgtgttttcgcagcccgtttcgagcgtggcg
cgcgatcccgcaggccgcgcgctctacgcagctttggccgacggaaccattcgacaagtg
caaatgtacacggtaaatccacacacacacatgatggaggccgttggcagtgggattgtc
acagttccagcagacccagaattggcctacacatttgtgcaccatggttcggccgaggtg
acgctgttggccatgtcgatggatggaattaaccttgtttcaggcgacagcgagggccgc
gttttcgtcacagacgtggtgaccaagcaagttgtgcgcgccttcactgcgggagcaagc
gtttcgcacttggaggttggcgtgttctcgcgtgagaaaaaggccgcgcctgcgcgcatg
cttattccgctcaagcgcgtggtggcggcgcaagatccgctcgagcatctggtggcagtg
cagatccgcgccgatgaacacggttctgccgccgctaaatcggcgcccgactttgcggcg
tggctcgaggaaaaagcgcaccaacaatgggaatttgcacaagaggcacccgaacaacaa
aagttacaaaaattgtcagcagcatacaatgcattgaaggagaactatgaaaagttgctt
gcgggaaaggaggaaaactga
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