KEGG   Clavispora lusitaniae ATCC 42720: CLUG_00273
Entry
CLUG_00273        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03013  Nucleocytoplasmic transport
clu03015  mRNA surveillance pathway
clu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLUG_00273
  09122 Translation
   03013 Nucleocytoplasmic transport
    CLUG_00273
   03015 mRNA surveillance pathway
    CLUG_00273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clu03019]
    CLUG_00273
   03041 Spliceosome [BR:clu03041]
    CLUG_00273
Enzymes [BR:clu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CLUG_00273
Messenger RNA biogenesis [BR:clu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CLUG_00273
Spliceosome [BR:clu03041]
 Complex C
  Other components
   EJC/TREX
    CLUG_00273
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CLUG_00273
SSDB
Motif
Pfam: Helicase_C DEAD Cas3-like_C_2 ApbA
Other DBs
NCBI-GeneID: 8499795
NCBI-ProteinID: XP_002619114
UniProt: C4XWF0
LinkDB
AA seq 290 aa
MPDVKTDVFYGGTPIARDLEKLKNKDTCPHIVVATPGRLHALVAEKGIRLGNVKSFVIDE
CDKVLESLDMRRDVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQSPLEIYVDDEAKL
TLHGLQQYYLKLSEKEKNRKLSDLLDSLEFNQVIIFVKSTQRANELNKLLCACNFPSIAV
HSGMKQEERIARYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPSEADQYLHRVGR
AGRFGTKGLAISFVSTKEDEEVLEKIQSRFDVKVTEFPEEGIDPSTYMNT
NT seq 873 nt   +upstreamnt  +downstreamnt
atgccagacgtcaagactgacgttttctacggaggaaccccaattgctagagacttggag
aagttgaagaacaaagacacttgtcctcacattgtcgtggctactccaggtagattgcac
gcgcttgttgcagaaaagggcattcgtttgggcaacgttaagtcgtttgttattgacgag
tgtgacaaggtcttggagtccttggacatgagaagagatgtccaagacatcttcagaaac
acccctcaccagaagcaggtgatgatgttttctgccaccttgtcgcaggaaattcgtcca
gtctgcaagaagttcatgcaaagcccattggaaatttatgttgacgatgaggccaagttg
actttgcacggtttgcaacaatactacctcaagttgtctgagaaggaaaagaacagaaag
ttgtcagacttgttggactctttggaattcaaccaggttattattttcgtcaagtctacc
cagagagctaacgagttgaacaagttgttgtgtgcctgtaacttcccttccattgctgtc
cactcgggcatgaaacaagaggaaagaattgctagatacaagtcgttcaaggagttcaac
aaacgtatctgtgtctcgactgatgtgttcggtagaggtattgacattgaaagaatcaac
ttggctatcaactacgacttgccaagtgaagctgaccaatacttgcacagagttggtaga
gctggtagatttggtactaagggattggccatttcctttgtttccaccaaggaggacgag
gaagtgttggaaaagatccaatcgagattcgacgtgaaggtcacagagttcccagaagaa
ggtatcgacccttcgacctacatgaacacttga

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