Clavispora lusitaniae ATCC 42720: CLUG_00689
Help
Entry
CLUG_00689 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03013
Nucleocytoplasmic transport
clu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUG_00689
03015 mRNA surveillance pathway
CLUG_00689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_00689
Enzymes [BR:
clu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLUG_00689
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CLUG_00689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
8499925
NCBI-ProteinID:
XP_002619530
UniProt:
C4XXL7
LinkDB
All DBs
AA seq
470 aa
AA seq
DB search
MAEKPTTDASELLASLSLQKEGHADVESAVSAAPKAETEKVDKEEKAPEPETNLIKSTYE
VQVKLADLQADPNSPLFSVKSFEELGLSPELLKGLYAMKYNKPSKIQEKALPLLLSNPPT
NMIGQSQSGTGKTAAFSLTLLSRVDESDNSVQAVCLAPARELARQTLEVIQTMGRFTKVT
SKLVVPGSYSADSTFNEHILVGTPGTLLDLIKRRRVNLSKVRVFVLDEADNMLDAQGLGD
QCVRVKKALPPTAQLVLFSATFPTEVRAYAERFVPNANSLELKQEELNVDGIKQLYMDCN
SEQHKFEVLCELYGLLTIGSSIIFVGTKRTADMLYQKMKQEGHTVSVLHGSLDNAERDRL
IDDFREGRSKVLITTNVLARGIDIASVSMVVNYDLPVDKDGKPDPSTYLHRIGRTGRFGR
VGVSISFVHDKRSYEVLKYIQQYFGDIEMTRVPTDDWDEVEKIVKKVIKN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaaacccaccacagacgcctcggagcttcttgcgtcgttgtcattgcaaaaa
gaaggccacgcagatgtagaatctgcagtttcggcggccccaaaggcggagacagaaaag
gtcgacaaggaagaaaaagcgcccgaaccagaaaccaacttgatcaaatccacttatgaa
gtccaggttaaattggccgacttgcaagcggaccccaactcgcctcttttctcagtgaaa
tcttttgaggagctagggttgtcgcccgaattgctcaaaggcttgtatgcgatgaaatac
aacaagccatcgaagatccaggagaaggcgttgcctcttttgttgctgaaccctcccacg
aatatgattggccagtctcagtctggtacaggtaaaacagctgcattttcgttgaccttg
ttgtctcgtgtcgacgaactggacaatctggttcaggcagtctgtttggccccagcaaga
gaactcgctcgccaaacgctagaggttatccagaccatgggccgtttcaccaaagtcacc
agcaagttggttgttcctggctcgtactctgccgacagcactttcaatgagcacattttg
gttggcacaccaggaaccttgttggatctcatcaaaagacgccgtgtgaatttgagcaag
gtgcgtgttttcgttttggatgaggctgacaacatgttggatgcacagggcttgggtgac
cagtgtgttcgagtcaaaaaggccttgccaccaactgcgcaattggttttgttctccgct
accttcccaaccgaagtccgcgcgtatgcagagaggtttgtgcccaatgccaactcgttg
gagttgaagcaggaagaattgaatgtcgacgggatcaaacagctatatatggactgcaac
tcggagcaacacaagttcgaagtgttgtgtgagttgtacgggcttttgaccattggttct
tccatcatctttgtgggaactaagcgcactgcagacatgttgtaccagaaaatgaagcaa
gagggccatactgtttctgttttgcatggatctttggacaacgccgaaagagatcgtttg
attgacgatttccgcgagggccggtccaaggtgttaattaccaccaacgttttggcacgt
ggaattgacattgcgtctgtttctatggtggtgaactatgatttgccagtggacaaggac
gggaagccagacccatcgacatatttgcacagaattggcagaactggtcgttttggccgt
gtgggtgtttccatctcgtttgttcacgacaagcgttcctacgaggtgttgaaatacatc
cagcagtactttggcgacatcgaaatgactcgtgtgcctactgatgattgggatgaggtg
gagaagatcgtgaagaaggtaattaagaattag
DBGET
integrated database retrieval system
