Clavispora lusitaniae ATCC 42720: CLUG_00775
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Entry
CLUG_00775 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLUG_00775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clu03041
]
CLUG_00775
Spliceosome [BR:
clu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CLUG_00775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
PRP4
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
Beta-prop_IFT140_2nd
WD40_RFWD3
DHFR_2
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
8500377
NCBI-ProteinID:
XP_002619616
UniProt:
C4XXV3
LinkDB
All DBs
AA seq
476 aa
AA seq
DB search
MAQTFAPVVNDRGKTDRQISLLIPTDDQEVRSELRKLGEPITLFGEGKAERRERLVRLVS
ERKHTNFEFAEVQDDSMDSDEEDEGEEEEEFYTPGDDALLEARKDILAYSIDRAMQRVDK
QRKVSASYNFAQVLRHRRNINSQLKQFEPQGSFTVKGNTRALNGVRINSSNSLVACSSWD
GHVTIFKRDTQESISQAVRSKPGYHTEKATLAWSPSESTTLASAGAEGTLNIWRVDDGSL
TNTYRRDNAHSGRIARTEFHPSGKYLATTSFDLTWKLWDVLRPEKEILEQEGHAKEVFAC
SFHPDGSLLATGGLDAIGHIWDLRSGRTIATLEGHIQGIYSMDWSPNGYHLASGSADCSV
KIWDMRKAHGAELFSIPAHTKIVSDVRFVQNTHSSPLAQPVADENEENTQTLDVSGTYLA
TSSYDGTVKLWSSDNWLHVKSLVGHTDKVMSVDVGKDASCIVSCGWDRTIRLWGKV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaacatttgcacccgtcgtcaatgaccgcggaaagacagaccgtcagatcagt
ttgctcataccaacggacgatcaagaggtgcgactggagctccgaaagttgggagagcca
atcactctttttggtgaaggcaaggctgaaagaagagagcgtcttgtacggctagtgagt
gaacgaaaacacaccaactttgagtttgccgaagtacaggatgatagcatggacagtgac
gaagaagatgaaggggaggaagaagaagaattctacacaccaggagatgatgcattacta
gaggcacggaaagacatactagcgtactctatagatagagcaatgcaacgagttgacaaa
caacggaaagtttctgcatcgtataactttgcccaggtgttgcggcacagacgaaatatc
aattcacaactcaaacaattcgagccccagggctcgtttaccgtgaaaggtaatactaga
gcattgaatggcgtccgcatcaacagttccaactctctagtggcatgttcctcctgggat
ggacatgtcaccattttcaaaagagacacacaagaatccatcagccaggcggtgagactg
aaaccgggctatcatactgaaaaggcgactttggcatggagtccttctgagtccaccaca
ctcgcttcagctggagcagaaggtactctcaacatatggagagtcgacgacggctcattg
acaaatacttatcgccgtgacaatgctcatagcggacggattgcgcggacagaattccat
cctagcggaaaatacttggcaacgacatcttttgacctcacctggaaactttgggacgtc
ttgcggcccgaaaaggagattttggaacaagagggtcatgccaaggaagttttcgcctgc
agcttccatcccgatggcagtcttttggccacgggaggcttggacgctataggccatatt
tgggacttgcgaagcggccgcactattgccacgcttgagggccacatccaaggaatctac
agtatggactggtctccaaatggatatcaccttgccagtggtagtgctgactgttctgtg
aaaatttgggacatgcgcaaagcgcatggagcagagcttttctcgatacctgctcatacc
aagattgtcagcgacgtacgatttgtacaaaacactcattcgagcccattggcacagcct
gtggcagacgaaaacgaagaaaatactcagacgttggatgtgtcgggcacatatctagcc
acaagttcctacgacggtacggtgaagctttggtcgtcagacaactggctccatgtcaag
tctttggttggccacacagacaaggtaatgagtgttgacgtggggaaagatgcgctgtgt
atagtgagctgcggctgggacagaaccatcagattatggggaaaggtatga
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