Clavispora lusitaniae ATCC 42720: CLUG_00867
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Entry
CLUG_00867 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12880
THO complex subunit 3
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03013
Nucleocytoplasmic transport
clu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLUG_00867
09122 Translation
03013 Nucleocytoplasmic transport
CLUG_00867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_00867
03041 Spliceosome [BR:
clu03041
]
CLUG_00867
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CLUG_00867
Spliceosome [BR:
clu03041
]
Complex C
Other components
EJC/TREX
CLUG_00867
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CLUG_00867
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR19_1st
WDR55
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_HPS5
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_VPS8
CFAP251_N
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_IP5PC_F
Beta-prop_EIPR1
Beta-prop_NOL10_N
B-prop_COPA_B_2nd
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
Tricorn_2nd
ASA1
Beta-prop_TEP1_C
WDR93
BBS2_Mid
TP_0598_N
WD40_2
Cytochrom_D1
NBCH_WD40
CRT10
Motif
Other DBs
NCBI-GeneID:
8499701
NCBI-ProteinID:
XP_002619708
UniProt:
C4XY44
LinkDB
All DBs
AA seq
316 aa
AA seq
DB search
MSAFFSNLRLFPARDLGSNGKPTQSEIVHVSINATGSRVINTRTDRSIRIWRSTVSLTDP
IVIENPHRGPVTCISWNPATETSFASVGGDGAVKLWKGSGHLEREIKLGKTAAHLVAYAP
DGDVMAVVADGSISIYNVAKGYTKIAHDSRPSKINALQWTNKGHNVFATGHDDGSICFWR
LDSMAIELLYTLQGHHSPVTCMCLDPRGRYLACGSREGIVSLWNTTDFTNLGVLSAVDRA
ISSLSASRDGTYLAVGYSEGADVKIYEYDTLTEVHNAPKSQAGKIGGQAAWFPNRTALII
VVDKGQVMSLAKKEVS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttcttttccaatctccgcctattccctgctagggatcttggaagcaatggc
aaacccactcaaagtgaaattgtacatgtttcaatcaatgcaacgggctcgcgtgtcata
aacacccgcacagatcgttcgattcgaatctggcggtctactgtatcattgacagacccc
attgtcattgaaaacccccacagaggacccgtcacgtgtatctcatggaaccctgctact
gaaacgtcttttgcaagcgttggcggcgatggagccgtcaaactatggaaaggtctgggc
catcttgaacgtgagatcaaattgggaaaaactgccgctcatttggtggcgtacgctcca
gatggtgatgtgatggcagtagtggccgatggcagcatttccatctacaacgtcgccaaa
ggttacacgaaaatagcacacgacagccgccctagcaaaatcaacgcgcttcaatggaca
aataaaggccacaacgttttcgccacgggccatgacgacggatccatatgtttttggcgc
cttgacctgatggccattgagcttttatatacgcttcagggccaccattcgcctgtcacg
tgtatgtgccttgatcctagagggagatatctagcttgcggcctgagggagggaattgtt
tcattatggaacactacagactttacaaacctcggtgttctttctgcagtagaccgagct
atcagcagcctttctgccagccgagacgggacgtatttggctgtgggttacagcgaaggg
gccgatgtaaaaatttatgagtacgatacactcacagaagttcacaatgcaccaaaaagt
caggcagggaaaattggtggacaggcagcgtggtttccaaatcggacagcgttgatcatt
gtggtcgataaaggacaagtgatgctgctcgctaaaaaagaggtgagctag
DBGET
integrated database retrieval system