Clavispora lusitaniae ATCC 42720: CLUG_01028
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Entry
CLUG_01028 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLUG_01028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_01028
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CLUG_01028
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CLUG_01028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
8499572
NCBI-ProteinID:
XP_002619869
UniProt:
C4XYK5
LinkDB
All DBs
AA seq
504 aa
AA seq
DB search
MNINPHLQYLQQQQSGSNQNGQSPQMSPMQMQQRHLQQQRQQLLSQHLQQQQQPQQPQQP
QQQQQQPQQPQQPQQPQQQNSNANPLLAVLNGGMNVQNGNNINPGGNASNMNFNQNVNPL
LQMQLQQLQQQPSRAQHSQSQQQGPQRPFQNQHHIPIQQQQQVPIIKEVWNFNLEHEFNA
LRSFVNDKTSSVFVSIHQEIPGIVARPVGTFKSSSDYHFQTLRSNADLLNLIQLSLCAVK
VRNNEISNSVIWQFNFAYDLAVEMFNEEHLSMLSQTAQINFASHMSRGIPHFNFAELMME
SGLLLDTSINWLSYHSGYDLGFLISLLTNDILPNDEKEFFWWTSKYFPNFFDMKHIGTQL
LSSSGGKIGNSGLNNIGNDKDPLGPSGISGAAGDLNKSLTSNNKPSVEYLAEELHLLPIS
PVIRQYFASSSLGQFASHQHQQMTSTLHAYLLMECFKELLRQANFDFSIFEKFKGYLWGL
GDVVEKSSIPNEKTKVTTSMKQLW
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaatcctcatctccagtacttgcaacaacagcaatctggatctaaccaaaat
ggccagtcgccacaaatgtctcccatgcaaatgcagcagcgccatttacaacagcagcgt
caacaactactcagtcagcaccttcagcaacaacagcagcctcagcagcctcagcagcct
cagcagcagcagcaacagccacaacaaccgcaacaaccccagcaaccccagcaacagaac
tctaatgcgaatcccttattagcagtgctcaatggaggaatgaatgtacagaacggcaac
aatatcaaccctggtggaaatgcttcgaatatgaatttcaatcagaatgtgaatcctttg
ttgcagatgcaattacaacaattacagcaacaaccttcacgggctcaacatagtcagtct
caacaacagggtccacagagacctttccaaaaccaacatcatattcctattcagcaacaa
cagcaagtgcccatcataaaggaggtatggaacttcaatttggagcacgagttcaatgca
ttgcggtcatttgttaatgacaaaacatcctcggtctttgtttcgatccatcaagagatc
ccaggcatcgttgcgagacctgtgggtactttcaagtcttcttcggactatcattttcag
acattaagatcaaatgccgatttattaaatctcattcagttgtcattatgcgctgtcaag
gttagaaacaacgagatcagtaactcggtcatttggcaattcaattttgcgtacgatttg
gcagtcgaaatgttcaacgaagaacacttatctatgttgtcccagacagcgcaaattaac
tttgcctctcatatgagcagaggcattcctcatttcaattttgcagaattgatgatggag
agcgggttgctcttggacacatctataaactggttgagttatcactcaggatatgatttg
gggttcctcatcagtttgttaacgaatgacattcttccaaacgatgaaaaggagttcttc
tggtggacatcgaagtactttccgaacttttttgatatgaaacatatcggcactcaatta
ttgtcgtcttcaggtggcaaaattggaaatagtggtttaaacaatattgggaatgataag
gatcccttaggaccatctgggatcagtggagctgcaggtgatttgaacaagagcctcact
tcaaataacaaaccatctgttgaatatcttgcggaagaattgcatttgctaccaatttct
cctgtgattcgtcaatattttgcgtcatcatcccttggacaatttgcaagccatcagcat
cagcagatgacttctactttgcatgcctacttactaatggaatgtttcaaggagttgctt
aggcaagcaaatttcgatttttcgatctttgagaaattcaaaggttatttatgggggctc
ggagacgttgttgaaaagtcactgataccaaatgaaaaaacaaaagtgactacttccatg
aagcaactatggtag
DBGET
integrated database retrieval system