Clavispora lusitaniae ATCC 42720: CLUG_01040
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Entry
CLUG_01040 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K26122
E3 ubiquitin-protein ligase substrate receptor MMS22
Organism
clu
Clavispora lusitaniae ATCC 42720
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clu04121
]
CLUG_01040
03400 DNA repair and recombination proteins [BR:
clu03400
]
CLUG_01040
Ubiquitin system [BR:
clu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul8 complex
Target recognizing subunit
CLUG_01040
DNA repair and recombination proteins [BR:
clu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CLUG_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mus7
Motif
Other DBs
NCBI-GeneID:
8499584
NCBI-ProteinID:
XP_002619881
UniProt:
C4XYL7
LinkDB
All DBs
AA seq
1616 aa
AA seq
DB search
MSELQYISDSDGDNSLPQLPESAIDMSLLNDFYSFLSGSSKERLRIEVRNTSLWSLFNHL
DNDFEDANPNSSQLLPSPTRTELPSTLQTEPNELDQISAAAHAPNDSSMTSLKTSSTETA
FRSLRKRNFSSRHPYIADQADWLGICTIDSINEMFTADEDLQKVVRALNTLYLKRKKRYP
DEDRYKAKNFYAHLGQNKLLALQGDPDAKPASKSEDESLSVLEENDDTLQNEEMDHDHEE
DDDDEDLIRLEDIQVPPVPSKQRHIHSYQHPTYESAEDTETSVSDENDDYEDEYVRVGGR
FRKLKTILRGVLPESAKRLDYFKHDLRKTKRRKIPERELEPRKGLAIRKIPSISKKSNQE
GLKSFVNDEESKEEYTPNYLRISHSPTASFEDLRAFRSTYINSNSDSGSGSDSNHEVFTD
LESTPMRNLTLNSNPNEITLVTSGSESIEEEDHIDYMFASKGTTKVAKPRQKGLHQRHIK
TSPFTGRSFTNMHSPYQSISLSGKRSKNAVIGRRTNKLRKKRRPQLSQQGFEHTNKNTYP
QEDASTAQHNANSVTHNLLPATEKEEGEGKLNKKTQVFHPIAPFFRRDPVMSTTAFEVES
DSKFIRDRNVRPTSHALSFLHRPQSIPENSYALIPLAPIDIPRIHTIGDGHIFCANENAV
SISLVEKKYSLGLYKLDSSIRETEKYFVQLRTLLSNTNMLSNPILRTDIKISLQRMTKWI
LIVREGIPNTILKQLQLTLDVLAKMHTKKIRLYLSVFHAQLLFILFIAIKLDSSLQQSEK
LKELDDYCTEYWSMFFSAISISDINKLCDDDGTNSSLFDSIQLIHFLYVGRTCSWWVPIT
ESLKEIGFFNEENASLLDALYVLASWFPRESDWSPFLIIFEKFKNAKVSVDHHHFLDICE
LAIEKLEWPIEERLIIHLYSSYGKRKFGNFADETVVPRPLHYVYSKHDIPKTSVFERFLR
LVYTYVSQLESKKSIKRLVSKLVASSQYHYQKGRRYQIMFVNRINLISLLCQISEVDLKN
QLSNLVEQVRDSRDMFVFGMAVSAIQLQCDVAHKKSFFMPWSGIQCLLESFCTYYDSLFG
LPSLFQSFVNYIGSKLISMQSCKEIILFFKLCERCSLDKFPDPILIDVLKYMASIDFESL
ASSTEFVTNYEKDFVEFQKYLLMFLSTEMSRLPVSQERFQIKIDQIVEQTIKIWFSISKC
TNTCNWNIVMLQKYSYLGNAFSRDRYLMFMCIQFASNHTLTSYEITEIDIILLKSLLAFD
LSTYTPHLLNILSKRNGSVFNFKRILLGDFQSVTQVLATRVQILSLVIQSVCSLSFDERE
QREYLLVLVKRLQDEYSIHFRNHTFKDFCKRTMELLLRFSQDKLDGLDDIWNFAAKLGFP
RRKNKELWKNVSEQERLQKVNNEFIDALHYNRDYHMVLDELLAPDDIDTIYSLIQVYVEA
VTINTDYWAQLSYLLKYLLVKLSRFQVQTQDNKFKIFLDFLCDLSLVSCRWKNKNSVIFE
LESLTTASHILHKAYYIYQGYKDRREIISYIHDFLTMIDQCSSKFQSRNLFTEITFGMLR
SVCHPNFNLNFQHSEEEYKAAYKRQDELMLALKGLVKTTEKREFDTEISTDFEFRL
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattgcagtacatttcagactccgatggcgataactcgctaccgcagctacct
gaatccgctatagacatgagcctactaaatgatttttattctttcttatccggttcttca
aaggaaagacttcgaatcgaggtcagaaataccctgctttggctgttatttaaccacttg
gacaatgactttgaagacgcaaatccaaactcttcacagcttttaccatctccaaccagg
acagagttacccagcacacttcaaacggaaccgaatgagttggatcagatttctgctgca
gcgcatgctccaaatgattcctccatgacgtcattgaagacatcttcgacggaaaccgca
tttcgaagtctacgaaagagaaatttctcaagtcgccatccttacattgcagatcaagcc
gactggttggggatttgtacaatagacagtattaacgagatgttcactgctgatgaagat
ctacagaaagttgtgcgagcgttgaataccctatacctcaaaagaaagaaaagatatcct
gatgaagatcgctacaaagccaaaaatttctatgctcatttgggacaaaacaaattactc
gcccttcaaggggatccagatgccaagccggcttccaaatctgaggatgaatccttactg
gtactcgaagaaaatgacgatactctacagaatgaagaaatggatcatgaccacgaggaa
gatgatgacgacgaggaccttatcaggcttgaggacattcaagtccctcccgtcccttca
aagcagagacacatccacagttaccagcaccccacgtatgagtcggcggaagatacggaa
acatctgtatccgatgaaaatgatgattacgaggatgagtatgtgagagtaggaggacgc
tttcggaaacttaaaacaatcctccgaggagtgttgcctgaatctgcaaagaggcttgac
tactttaaacatgatttacggaagacaaaaaggagaaagatacctgagcgtgaattagaa
ccacgaaaaggacttgccattcgaaaaatcccatccatatctaaaaaaagcaatcaagaa
gggctaaaatcgttcgttaatgatgaggaatcgaaggaagagtataccccgaactatcta
cgcatttcccattccccaactgcatcctttgaagatttaagggctttccgatctacgtat
attaattctaattctgattctggctccggttcagattcaaatcatgaagtattcacagat
ttggaatctacccccatgcgcaaccttacgttgaattcgaacccaaatgaaataacttta
gtgaccagtggaagtgagtcaatagaagaggaagatcatattgattatatgtttgcatcg
aaaggtacaactaaagttgcgaagccgaggcagaaaggattacatcaaagacacattaaa
acatcaccatttactggacgaagtttcaccaatatgcatagtccgtatcaatcaatatcc
ctttcgggaaaacgtctgaaaaatgctgttatcggacgacgaactaataaattgaggaag
aaaagacgtcctcaattatctcaacaaggatttgagcatacaaacaaaaatacataccca
caagaggatgcactgactgcacaacacaatgcaaactctgtgacacataacttacttcca
gctacagagaaagaggaaggtgaaggaaaacttaataagaagacacaagtctttcatcct
attgcaccattttttagacgtgatccagtaatgagcaccactgcgtttgaggttgagagc
gattcaaagtttatacgcgatcggaacgtacgccctacatctcatgccctttcttttctt
cacagaccacaatctattccagaaaactcctatgcattgatacccctagcgcccattgat
atacctagaattcacaccattggcgatgggcacattttctgcgctaatgagaatgcggtt
tccatcagcctcgttgagaaaaagtactcattgggcttatacaaattagattcttctatt
cgggagacggaaaaatattttgttcaattgcgaactctcttgctgaatacgaatatgctt
tccaaccccattctccgaactgatattaaaatatcgttacaaagaatgactaaatggatt
ttgatcgtacgtgaaggcattcccaatactatattaaagcaactacaattgacgttggat
gtattagcgaagatgcatacaaagaagattagattatatctatcagtatttcacgctcag
ctccttttcattttattcatcgctatcaaattagattcaagtttgcaacagtcagaaaaa
ttaaaggagcttgacgactattgcacagagtactggtctatgttttttctggccataagc
atctcagatataaataaactctgcgatgatgacggcacaaattcttctctattcgactcg
attcaactcattcatttcctctacgtcggtagaacgtgcagttggtgggttcccataacg
gaatcgttgaaagagatcggctttttcaatgaagaaaatgcgtcactattggatgcatta
tatgtacttgcctcgtggtttccacgcgaaagcgactggagtccgtttttgattattttc
gaaaaattcaaaaatgccaaggtatccgtcgaccatcaccatttcctagatatttgcgaa
ctagcaatcgagaagcttgaatggcctatcgaagaacgcttgattattcacctttattct
tcttatggaaaaagaaagtttggaaactttgctgacgagacggtagtaccccgacccctt
cactacgtgtattcaaaacatgatatccctaagacgagcgtttttgaaagatttttacgt
cttgtctacacctatgtgtcccagcttgaatccaaaaagtccatcaagaggttggtctct
aagttagttgcgtcgagtcaatatcattatcagaagggcagaagatatcaaataatgttt
gtcaatcgaattaatctcatttcacttctctgtcaaatatctgaagttgatttaaaaaac
cagctttccaatcttgtcgaacaagtaagggactctcgggatatgttcgttttcggaatg
gcagtgagtgcgatccagttgcaatgtgacgtagcgcacaaaaaatccttcttcatgcca
tggtctggtattcaatgtctattagagtcattctgtacctattacgactccctttttggt
ttaccttcgctatttcagtcatttgtcaattacatcggatcaaaattgatcagcatgcaa
agttgcaaagagataattttatttttcaaactttgtgaacgttgcagtcttgataaattt
ccagatcctattcttatcgatgtattgaaatatatggcaagcattgatttcgaaagcctt
gcctcttctaccgaatttgtcactaattatgagaaggatttcgtcgaatttcagaagtat
ttgctcatgttcttgagtacagaaatgctgagacttccagtatctcaagagcgatttcaa
ataaaaatcgaccagatagttgaacaaacgataaaaatttggtttctgattagcaaatgt
accaacacatgcaattggaatatcgttatgctacagaagtattcttatcttggcaatgcg
tttctgagagatcgctatctaatgtttatgtgcattcaatttgctagtaatcacacttta
acgagttatgagattactgaaatcgacatcatacttttgaaaagtttattggcattcgat
ttgtccacctataccccccatttattaaacatactcagtaaacggaatggttctgttttt
aatttcaagagaatactccttggagatttccagtccgtcacgcaggtattggctacgcgt
gttcaaatcttatcacttgttattcagtctgtatgttctcttagctttgatgaaagggaa
caaagagaatatcttctcgttttagtgaaacgattacaagatgaatactcgatccacttt
aggaaccatacattcaaagacttctgcaaacgtacgatggaattacttcttcgtttttct
caggataaacttgacggtcttgatgatatttggaattttgcagctaagttaggtttccct
aggagaaagaataaggaactctggaagaatgtatcagaacaagaacgattgcagaaagtt
aataatgaattcattgatgctcttcattacaacagagactatcatatggttttggatgag
ttgcttgctccagatgatattgatactatttattccctcattcaagtgtatgtcgaggcg
gtgacaattaatacggactattgggcacagttatcctaccttttaaaatacttgctcgta
aagctttctcgctttcaagttcaaacacaagataataagtttaagatatttctagatttt
ttatgcgacttgtcattagtttcttgccgttggaagaacaaaaatctggtcatttttgaa
cttgagtcactcaccacagcttcgcatattcttcacaaagcatactacatctaccagggg
tacaaagatcgacgtgaaattatttcttacatccatgattttttaacgatgatagaccag
tgttctctgaaattccagtcaaggaatttgtttacggaaatcacatttgggatgttgaga
agcgtatgtcaccccaatttcaaccttaatttccagcattcagaggaggaatacaaagca
gcatacaagcgacaagatgagcttatgcttgccctaaagggattagtaaaaaccacagag
aaacgtgaattcgatactgagatatcaacagactttgaatttcggttataa
DBGET
integrated database retrieval system