Clavispora lusitaniae ATCC 42720: CLUG_01963
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Entry
CLUG_01963 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03420
Nucleotide excision repair
clu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLUG_01963
03430 Mismatch repair
CLUG_01963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clu03400
]
CLUG_01963
Enzymes [BR:
clu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLUG_01963
DNA repair and recombination proteins [BR:
clu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLUG_01963
MMR (mismatch excision repair)
Other MMR factors
CLUG_01963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
8499375
NCBI-ProteinID:
XP_002618504
UniProt:
C4Y181
LinkDB
All DBs
AA seq
924 aa
AA seq
DB search
MTPSSEKFSKRKAQSTKQARLPESFFSGSGLSDHVGSSDPGTSSVHPPLGISNTHFQSQN
RNCSSVSSILSENHSTTAPSVDSLFSSLNHEQKMAAEASPGILQIVAGPGTGKTKVLVSR
VAHLLLRQRIPPQNIVVTTFTKKAAAELVERLRVLGPQVDVDKILVGTFHSICFRLVRRF
GAKIGLPRVSVADEKDAVQLVAQALEKVDVSAYPDDETAPFKARSGIDSKKVRRHLSRLK
ASSAEMSRSPADGKRFISRVSSLYQELLTASHLIDFDDCLILALRLLRDHHILPHVEHTL
VDEFQDCSAVQLELMYAFSQGRSVTVVGDPDQSIYAFRAAQSGTFGDMRRHYEELGCTYQ
VVRLTENYRSTAAILALSERVMRQQMGREEKTLRAQHTASILPGYACLDSAAQEARWIAH
HISHLGQYEIFDRADFAVLVRTAYQTRAIETEFARAKIPYTIVKGRAFWERRDVVAVVDY
LRAVASDYDRLALFRALNVPRRGFGPKSVAELVQLHEKHKCSAFETLKQVASGAIQSSLG
QKAQAQLTGFVNFVEKARSCLSECYEANDLGRFFNYVYVQSGLEKELEPDSEGNISEVRS
QLAQFVSEDEEVSGQMGEIETEKEELRIRVDTGDKNISISKIKKAESNLDVGREHLRQFL
ESLSLFDTDSSQESSQKVSISTIHGAKGLEWPVVFVPGLSEGLLPASFAVDDSKPETINE
ERRCFYVAASRAKVLLFLSAYTEDSDGQWGRKPIEKPSRFLKDLEGLICSKLSWPQETIE
ILQTITGRSPTKVDYKKLEEKYQLCLQAYVRKGVDPTSVTTGFASANEFKRNGKAPAYIP
VRPSKKHNSHPMASPIIAPELKKTSFDRRNYAPKFSSPACNSDSTSRQKMAPEISAASSA
STSVKRAPAYIPTRTTTKRRLGTR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgactccgtcatccgaaaagtttctgaaaaggaaagcacagtctactaaacaagcgcga
ctaccagagctgttcttctctggatctggtctttctgaccatgttggttcatctgatcca
ggaacgtcgagtgtccatccaccactaggaatactgaatacccattttcaatctcaaaat
cggaattgctcttctgtctctctgattctaagtgagaatcactccaccactgcgccttct
gtggactcgctattctcgtcgctcaatcacgagcaaaagatggccgcagaggcgtctcct
ggtattctacaaattgtggctggtcctggcaccggaaaaaccaaagtacttgtttcacgt
gtggcacaccttcttctacgccagcgtattccgccgcagaatattgtggtgacaactttc
accaaaaaggccgccgccgagttggttgagcggcttagagtccttggaccgcaggtggac
gtggacaaaatccttgtcggaacgttccacagcatttgttttaggctagtacggcgcttc
ggggcaaaaattggtcttcctcgcgtgagtgtggccgatgaaaaggatgcggttcagtta
gtggctcaggctttggaaaaagtcgatgttagcgcatatcccgacgacgaaacggctcct
ttcaaagcaaggtctggtatcgactccaaaaaggtccgccgccatctctcccgcctaaaa
gcaagtctggcggagatgagccggagtcctgccgatggcaaacgtttcatctctcgtgtg
ctgtccctctaccaagaattacttacggcaagccatcttatagactttgacgattgtctc
atccttgctctccgtctactaagagatcatcacattctaccccatgttgagcatacttta
gtggacgagtttcaggattgctctgcagttcaactcgagctcatgtacgcattttctcaa
ggccgcagcgtgacagtggtaggcgatcctgatcagagcatctacgcttttcgagctgcc
caaagcggaactttcggcgacatgcgccgccactacgaagaattgggctgtacataccag
gtagttcgtcttacagagaactatcggtcgactgcagcgattctcgctctctcggaacgg
gtgatgcgacaacagatgggacgagaggaaaaaacccttcgggcacagcacactgctagc
attttgcctggttacgcttgtcttgattctgctgcgcaggaggcccgttggattgcacac
cacatctctcacctagggcagtacgagattttcgatcgggcagactttgctgtgcttgtg
agaacggcgtatcaaacacgcgcaatagaaacggaatttgcccgggcaaaaatcccatat
accattgttaaagggcgggctttttgggagaggcgtgatgtggtggcagttgtggattat
ttgcgggcagtagcgagtgactatgatcgcttggcgcttttccgggctctcaatgttcca
cgtcgaggtttcgggccaaaatccgtcgcggagttggtacaactccatgaaaaacacaaa
tgtctggcttttgaaacattgaaacaagttgcgtcaggtgcaatccagtcgtcgttgggc
caaaaagctcaggcacaacttacaggttttgtgaactttgtggaaaaagctcgtagctgc
ttatcggaatgttatgaagcaaatgacttgggccgctttttcaattatgtgtacgtccag
tcagggctagagaaggaactagagcccgattcggaaggaaatatactggaagtgcgttct
cagctagcgcaatttgtgctggaggacgaggaagttagtggccaaatgggggaaattgaa
acagaaaaggaagaattgagaattcgggtagatacgggggacaaaaatatcagtatatcc
aagatcaaaaaggcagagagcaatttagatgtaggtcgtgaacatcttcgccagtttctt
gagctgctttctctttttgacacagatctgtcccaagaatcgtcacaaaaagtatccatc
tcaaccatacacggtgccaaaggtttggagtggcctgttgtttttgttccgggtctcagt
gaaggcttacttcccgcaagttttgctgtggatgatagtaagccagagaccatcaatgag
gagcgccgctgtttttatgttgctgctagcagagccaaagtgctattgtttctttccgcc
tacactgaagatctggatggccaatgggggcggaaacccattgagaagccatctcgattt
ctcaaggaccttgaaggtttgatctgctcaaaattgtcttggccacaagaaaccatagaa
attttgcaaacgatcacgggtcgtctgccaacaaaggtggattacaaaaaactagaggaa
aagtatcagttgtgcttgcaagcatatgtgaggaaaggcgtcgatccaacttctgtcact
acgggttttgcatctgcaaatgaattcaagagaaacggaaaagcaccagcttatatcccc
gtacgaccaagcaaaaaacataattctcatccaatggctctgccaataatagcaccggag
ttaaaaaagaccagtttcgatagaagaaactatgcaccgaaattctctagtcccgcgtgc
aatagcgattctacttcacgacaaaaaatggctcctgaaatatcagcggcttcatccgca
tctacttctgtcaaaagagctccagcgtatattcctactcgtactacaacgaagcgacgt
ctcggtacaagatga
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