Clavispora lusitaniae ATCC 42720: CLUG_02006
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Entry
CLUG_02006 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
clu
Clavispora lusitaniae ATCC 42720
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clu04131
]
CLUG_02006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clu04147
]
CLUG_02006
Membrane trafficking [BR:
clu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CLUG_02006
Exosome [BR:
clu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CLUG_02006
Exosomal proteins of bladder cancer cells
CLUG_02006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
TPR_COPA_B
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT140_1st
DUF4309
TusA
Motif
Other DBs
NCBI-GeneID:
8498760
NCBI-ProteinID:
XP_002618547
UniProt:
C4Y1C4
LinkDB
All DBs
AA seq
1204 aa
AA seq
DB search
MKMLTKFESKSSRAKGVAFHPKRPWVLVALHSSTIQLWDYRMGTLIDRFEDHDGPVRCVA
FHPTQPLFVSGSDDYTVKVWSLNTRKCIFTLSGHLDYVRCVSFHHDLPWILTCSDDQTIR
IWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDITGLRKKHSAPTSAP
RSFEDQLQRKQLPQQDIFGNVNAIVKYVLEGHDKGVNWAAFHPTLPLIVSAGDDRLVKLW
RMNDIKAWEVDTCRGHTGNVLCAVFHPHEDLILSVADDKTIRVWDLNKRTPVKQFRREND
RFWLVACHPTINLFATCHDSGVMVFKLERERPAHALFNNKLYYVNGEKQIQSYDFTRDEA
SLPMMSLKKIGKTWAFMRTLSYNQADNAVLVTHGEGENGMYALVTLPKHVTGAIEPTDVR
SGEGNFACFISRNRFVSFVKASKILYVKDMNNNVTKTIQLDSSVTDVLAGNPGRVLLVKP
HSVVNYDVQQRKELGELSANNVKYAAWSNDGSHLALMSKHTITIATKDLDLVTSMHETIR
IKSAAWDDSGVLLYSTLNHIKYTLLNGDSGIIKTLENTLYITKVAQNKLYCLNRSGNVEV
VTIDPTEYRFKRSLVNRNFGEVLRIIHNSNLVGQNIIAYLQQKGYPEVALQFVQDPETRF
ELALECGDLKIAETEAAKLKDRVTWEKLGHEALSQGNVEIVERVYQQLELFDKLSFLYLY
KGDQERLNKMSLIANARGNLSSLVQNTLYNNDVETRIDAFLRCGMYPLAYTLAASSGMND
RANQILEAAGVSSKDVQLGEMGAPAPLPVPVETAGNWPVKESSMSVFETALVTGKVEDLN
IGEDEEKPAEVSTQLDFNDGLDDDLEEEGGWDMDDDDLDIGDEFGDAGELEDEFPIKAEG
ADGEIAHWLRNNKTAAGCVAAGAFDQAASLLNKQLGVVNFEPLRKRFMEVYSCNKLSLPG
VNDLPAMRDYIREDNDEDDPKRFRPLIPGYDTLEDKLNVAFKFFRANNLPDAIAVFREII
HTIAVLTVEDEEQEAKCDDILTLCREYILGLSIELERRSLDSSQLQRNLELAAYFTRAKL
QNSHRVNALQVAMSQSFKNKNYSSASYFAGELLSIISTGSKAEQAQKIKARADTIASDAI
EIDFDPYAEFDICCASFTPIYKGTPFVTEALVGAKYKSEYKNQVCRITEVTRVGAPASGL
RIRG
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctcaccaaattcgagtccaagtcttccagggccaaaggcgtggcgttccac
ccgaaaagaccctgggtgcttgtggctttgcactcgtcgaccatccaattgtgggactac
cgcatgggaactttgattgaccggtttgaggaccacgacggtccggttcgatgcgtggcg
ttccatccaacgcagccgcttttcgtgtctggctcggacgactacaccgtgaaagtgtgg
tcgttgaacacgcgcaagtgcattttcaccttgagcggccacctcgactacgtgagatgt
gtttcgttccaccacgacttgccgtggatcttgacgtgcctggacgaccagaccatccgc
atctggaactggcagaaccgccaggagatcgcctgcttgacgggccacaaccactacgtg
atgctggcccagttccacccatctgaagatttgattgtgtctgcttctttggaccagacc
gtgcgggtgtgggacatcacaggcctccgcaagaagcactcggcgcctacactggcccct
cgctcgtttgaggaccagttgcagcgcaagcagttgccccagcaggacattttcggcaac
gtcaatgccatcgtcaagtatgtgttggagggccacgacaagggcgtcaactgggcggct
ttccaccctactttgcccttaattgtgtctgctggtgacgacagactcgtcaagttgtgg
cgcatgaacgatatcaaggcctgggaggtggacacttgccgtggccataccggaaacgtg
ctctgcgccgtgttccaccctcatgaggacttgatcttgtctgtggctgacgacaagacc
attcgcgtgtgggacttgaacaagcgcacgcctgtcaagcagttccgccgtgaaaacgac
cgtttctggcttgtggcctgccatcctacaatcaacttgtttgccacgtgccacgactcg
ggtgtgatggtgttcaagcttgaaagagagagaccagcgcatgcgctcttcaacaacaag
ttgtactacgtgaatggcgagaagcagatccagagctatgactttactcgcgacgaggcg
tctttgcctatgatgtctttgaagaagataggcaagacctgggcgttcatgcgcaccttg
tcgtacaaccaggccgacaatgcggttttggtgacacacggcgaaggcgaaaacggcatg
tatgcgttggtgacacttcctaaacatgtgacgggcgccattgagcccacagacgtccgt
ctgggcgaaggaaactttgcctgtttcatctcgcgtaaccgtttcgtcagctttgttaag
gcctccaagatcttgtacgtcaaggacatgaacaacaacgtgaccaaaaccatccagtta
gactcttctgtgactgatgttttggccggcaacccgggccgtgttttgttggtgaagcca
cactctgtggtcaattacgacgttcaacaacgcaaagagttgggcgaattgagcgccaac
aacgtcaagtacgccgcttggtccaacgacggtctgcacttggccttgatgtccaagcac
accatcaccatcgccaccaaggacttggacttggtcacttccatgcacgagacaatccgt
atcaagagtgctgcttgggatgactctggtgtcttgctctattctactttgaaccatatc
aagtacactttgttgaacggagacagcggtatcatcaaaactttggagaacaccttgtac
ataaccaaggtggcgcaaaacaagctctactgcttgaatcggtccggtaacgtcgaggtg
gtgacgattgacccaacagaataccgtttcaaacgttctttagtgaaccgcaactttggc
gaggttttgcgcatcatccacaactccaacttggtgggccagaacatcattgcctacttg
caacagaagggctaccccgaagttgcattgcagtttgtccaagacccggagactcgtttt
gaattggcgttggaatgtggcgacttgaagattgctgaaacagaggccgccaaattgaag
gacagagtcacttgggagaagttgggccatgaagctttgagtcagggtaatgtcgagatt
gttgaacgtgtctaccagcagttggagttgtttgacaagttgtcattcctctacttgtac
aagggcgaccaagaaagattgaacaagatgtccttgattgccaacgccagaggcaacttg
tcgtcgttggtgcagaacacactttacaacaacgatgttgaaaccagaatcgatgccttc
cttagatgcggcatgtatccattggcatacaccttggcagcttcaagcggcatgaatgac
agagccaatcagattttggaagcggctggtgtgagtctgaaggacgttcagctcggtgaa
atgggagctccagcaccattgcctgttccagttgaaactgccggtaactggccagtcaaa
gaaagcagcatgtcggtgtttgagacggccttggtcaccggtaaggtggaggatttgaac
attggcgaagacgaggaaaagcctgccgaagtttcaacccaacttgatttcaatgacggc
cttgacgatgacttggaggaagaaggcggttgggacatggacgatgacgaccttgacatt
ggcgacgagtttggcgacgcaggcgagttggaagacgagtttccaatcaaggccgaaggt
gctgacggtgaaattgcccactggctccggaacaacaaaactgcggctggctgtgtggca
gcaggagcctttgaccaggcggcgtctttgttgaataagcaactcggtgtggtgaacttc
gagccgttgcgtaaacgtttcatggaggtttactcgtgcaacaagttgagtttgcccggc
gtcaatgacttgcctgctatgagagactacattcgcgaggacaatgacgaggacgatcca
aagcgcttcagaccactcattcctggttacgacacgttggaagacaagttgaatgttgcg
ttcaagttcttccgtgccaacaacttgcctgacgccattgccgtgttccgcgaaatcatc
cacaccatcgcagttttaactgtcgaggacgaggaacaagaggcaaaatgcgatgacatc
ttgaccttgtgtcgtgagtacatcttgggcttatcgatcgagttagagcgtcgttcgctc
gacctgtcgcagttacaaagaaacttggagttggctgcgtacttcacgcgggcgaaactt
caaaactctcatcgggtgaatgcattgcaagtggccatgctgcagtctttcaagaacaag
aactactcgagcgcatcgtactttgctggcgagcttttgagtattatttcgaccggaagc
aaagctgagcaggcgcaaaaaatcaaggctcgtgctgataccattgccagcgacgctatc
gaaatcgactttgacccatacgcagagtttgacatttgttgtgcatccttcactccaatc
tacaagggcactccgttcgtcacggaagctttggtgggcgcaaagtacaagtcggagtac
aaaaatcaagtgtgtcggatcaccgaggtgacccgtgtgggagccccagcgtcggggttg
cggatccggggctaa
DBGET
integrated database retrieval system
