Clavispora lusitaniae ATCC 42720: CLUG_02075
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Entry
CLUG_02075 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLUG_02075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_02075
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_02075
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CLUG_02075
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CLUG_02075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
VHS
SpoVR
Motif
Other DBs
NCBI-GeneID:
8498461
NCBI-ProteinID:
XP_002618617
UniProt:
C4Y1J3
LinkDB
All DBs
AA seq
433 aa
AA seq
DB search
MSEEPFSAEYFQHLLTSLTLNSRALIVELTGLAEKHIDHAAVMVQLIEERIARILPKYKL
YSFYLLDSIVKNIGNPYNLLFAANLYKNFTDTYLIVTDTATRQNLINLFKTWLTGKTLAG
QDLFPQEILAKIEKFIIKATSLNAAAPDAGAARISRDALLREANYLLQYVIALDDGVDKL
AQAHSLSENNTAFVQECRRARNTMVYDINSISESVMMESKAEFDAKKDSYALSLQKIRRT
LDDQSFQQQDLVSRLTRALESKVELNLVPKHVDVLMILGVSAYDEFDTFLAQWGKIPVQT
APAETVPAVKDSDSKTGAESETAIETETEAEAEPRSPETTASLASTFGLNMDSFNFADSL
LGSPKNEIRHMRSNSYSDDSMDEDEYDPEETLNEVDGRHSPPSSAGPVFAGKSSMKRPAN
GEERVVKRVRFDL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagcccttcagtgccgagtactttcaacacctactaacatcgcttacgctc
aattccagagccttgattgtggagctcacaggcttggcagaaaaacacattgaccatgct
gctgtgatggtgcagcttatcgaggagcgcatcgcccgcatcctccccaaatacaagctc
tacagcttctacttgttggactccatagtcaagaacattggcaacccttacaacttgttg
tttgccgccaacctctacaaaaacttcaccgacacctacttgattgtcaccgacacggcc
acgcgccagaacttgatcaacttgttcaaaacctggttgacgggcaagacgttggctggc
caggacttgttcccgcaagagatcttggcgaagatcgagaaattcatcatcaaggccacg
tcgctcaacgctgcagcgcccgacgccggcgccgcccgcatctccagagacgccttgcta
cgagaagcaaactacttgttgcagtatgtcattgctttggacgacggcgtcgacaaacta
gcgcaggcgcatctgctttcggaaaacaacacggccttcgtgcaagagtgccgccgggcc
agaaacaccatggtctacgacatcaacagtatcagcgagtcggtgatgatggaaagcaaa
gcggaattcgacgccaagaaggactcctacgctcttctgctccagaaaatccgtcggacg
ctcgacgaccagagcttccagcagcaggatcttgtgctgcgcctaacgcgggcgctcgag
ctgaaggtggagctcaatcttgtgcccaaacatgtggatgtgttgatgattttgggcgtt
tccgcatacgacgaattcgacacgtttttggcccagtggggcaagatcccagtccagaca
gcgccagcggaaacagtgccagcagtgaaagacagtgacagcaagacgggcgcagaaagc
gaaactgcaatagaaacagaaacagaagcagaagcagaaccgcgcagcccggaaaccaca
gccagtttggcatccacttttggcttgaacatggactcattcaactttgcggactctttg
ctcgggagcccgaagaatgagatccgccacatgcgtctgaatctgtacagtgacgatctg
atggacgaggacgaatatgatccagaagaaacgcttaacgaagtagacggaagacatagt
ccgcccagcagcgccggacctgtctttgcggggaaatccagcatgaaacggcccgccaac
ggcgaagaacgcgttgtcaagagggtgcgtttcgatttgtaa
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