Clavispora lusitaniae ATCC 42720: CLUG_02232
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Entry
CLUG_02232 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLUG_02232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clu03041
]
CLUG_02232
03009 Ribosome biogenesis [BR:
clu03009
]
CLUG_02232
Enzymes [BR:
clu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLUG_02232
Spliceosome [BR:
clu03041
]
Complex A
U1 snRNP components
U1 related factors
CLUG_02232
Complex B
CLUG_02232
Ribosome biogenesis [BR:
clu03009
]
Eukaryotic type
Pre-60S particles
Helicases
CLUG_02232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
8498391
NCBI-ProteinID:
XP_002618773
UniProt:
C4Y200
LinkDB
All DBs
AA seq
419 aa
AA seq
DB search
MSDYNGGYNNYNSGYNNYNNQGSYRNDRNGGFRGGRGGRFGGRRVDERIELTTPEWDLDS
LPKFEKNFYTEHPDVAARSDAEVAAFRKEHDMTVEGQDIPKPITSFEEAGFPDYVLSEVK
QQGFPKPTAIQCQGWPMASSGRDMVGIASTGSGKTLSYCLPAIVHINAQPLLKPGDGPIV
LILAPTRELAVQIQTECSKFGSSSRIRNTCIYGGAPKGQQVRDLARGVEICIATPGRLID
MLETNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKNLT
RDYLVDPIQVTIGSLELSASHTITQLVEVVSEFEKRDRLLKHLETATADKEAKCLIFCST
KRACDEVTSYLRGDGWPALAIHGDKDQNERDWVLREFRSGKSPIMVATDVAARGIGMCF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactacaacggaggttacaacaactacaacagtggctacaacaactacaacaac
caaggcagctacagaaacgaccgtaacggtggattcagaggcggcagaggtggccgtttt
ggcggaagaagagtcgatgagagaatcgaattgaccactcctgaatgggacttggactcg
ttgccaaagttcgagaagaacttttacacagaacacccagacgtggctgcacgttcagac
gccgaggttgctgctttcagaaaggaacacgacatgaccgtcgagggccaggacattcca
aagccaatcacttctttcgaagaggctggtttcccagactatgtgttgagcgaagttaag
caacaaggcttcccaaagccaactgccatccagtgtcaaggttggcctatggcttcgagc
ggtagagacatggtgggtattgcctccactggttccggtaagactttgtcttactgtttg
ccagctattgtgcacatcaacgcccagcccttgttgaaaccaggtgacggaccaattgtg
ttgattttggctcctaccagagagttggctgtgcaaatccaaacagaatgttccaagttt
ggttcttcttctagaatcagaaacacctgtatttacggaggtgctcctaagggtcaacag
gtcagagacttggccagaggtgtggaaatctgtattgccactccaggtagattgattgac
atgttggaaaccaacaaaacaaaccttagaagagtcacatacttggttttggacgaagcc
gacagaatgttggatatgggtttcgaacctcagatcagaaagatcgtcgaccaaatcaga
ccagaccgtcaaactttgatgtggtctgctacctggcctaaggaggtcaagaacttgacc
agagactacttggtggaccctatccaagttaccattggttctttggaattgtctgcttct
cacacaatcacccaattggttgaggttgtcagcgaattcgagaagagagacagattgctc
aagcacttggaaactgccactgccgacaaggaagccaaatgtttgattttctgttctacc
aagagagcttgtgacgaagtcacttcttacttgagaggagacggctggcctgctttggcc
atccacggtgacaaggaccaaaatgagagagattgggttttgagggaatttagatcgggc
aaatcgcctattatggtggccaccgatgtggctgccagaggtattggtatgtgtttttga
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