Clavispora lusitaniae ATCC 42720: CLUG_03276
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Entry
CLUG_03276 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03022
Basal transcription factors
clu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLUG_03276
09124 Replication and repair
03420 Nucleotide excision repair
CLUG_03276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_03276
03400 DNA repair and recombination proteins [BR:
clu03400
]
CLUG_03276
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLUG_03276
DNA repair and recombination proteins [BR:
clu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLUG_03276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
zf-HIT
VWA
DUF6999
FYDLN_acid
Motif
Other DBs
NCBI-GeneID:
8497092
NCBI-ProteinID:
XP_002616035
UniProt:
C4Y542
LinkDB
All DBs
AA seq
459 aa
AA seq
DB search
MDSDDDFSAHSAESDVPLSPDSDGMARRTRARASEPKQAAYAWEDEYQRTWDIVKDDTSR
PVELLVQQMVDARKAKLSRNAATPFQRGIIRTVVVVVDASRAMLEKDLRPTRFGATVAHL
QDFVAEFFDQNPIAQMAVVMMRNGVASVVSELSGSAQLHIERLRALRARQHTLEPKGDPS
LQNALELARALLTAGGGPTSRSSREIVVVFGALFTSDPGDIHQTIDSLVRDEIRVRVIGL
AAQVAICRELVARTNAGECAGYGVIVGDAHFRELLMACVEPLAVARRAAETATGVPVLRM
GFPSRAPAAPGMPVLCACHPQGGGADTGYWCPQCRSRVCSLPCVCPVCGLMLILSTHLAR
THHHLVPPPDYETKEETKETKETNDSNNDNSNSNNDSSNSNNDSSGNSSERCFGCLAQGD
GALGARYACAACGQRFCIDCDVFVHEVLHNCPGCEARAA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacgacgacttttctgcacacctggcggagctggacgtgccgctttcgccc
gactcggacggaatggcccggcgcacacgcgcacgcgcctccgagcccaagcaggccgcc
tacgcctgggaagacgagtaccagcgcacatgggacattgtcaaggacgacacgctgaga
ccggtggagctcctcgtccagcagatggtggacgcacgcaaggccaagctcagccgcaac
gccgccacgccgttccagcgcggcatcatccgcacggtggtggtggtggtggatgcgtcg
cgggccatgctcgagaaggacttgcggcccacgcgctttggcgccacggtggcgcacctc
caggactttgtggcggagtttttcgaccagaacccgatcgcgcagatggccgtggtgatg
atgcgcaacggcgtggcgtcggtggtgagcgagctcagcggcctggcccagctccacatc
gagcgcctccgggcgctccgcgcgcgccagcacacgctcgagcccaagggcgacccgctg
ttgcagaacgcgctcgagttggcgcgggcgcttctcacggccggcggcggaccgacgtcc
cgcagctcgcgcgagatcgtggtggtgtttggcgctcttttcacgctggacccgggcgac
atccaccagaccatcgactcgcttgtgcgcgacgagatccgcgtgcgggtgatagggcta
gcggcgcaggtggccatctgccgcgagcttgtggctcgcaccaacgccggcgagtgtgcg
ggctacggcgtgatagtgggcgacgcgcacttccgcgagcttctcatggcgtgcgtggag
ccgcttgcggtggcgcggcgggcggccgagacggccacgggcgtgccggtgcttcgaatg
ggcttcccgctgcgggcgccggcggcgccgggcatgccggtgttgtgtgcgtgccatccg
cagggcggcggcgccgacacgggctactggtgcccgcagtgccgcagccgcgtgtgtctg
cttccgtgtgtgtgtcccgtgtgcgggctcatgttgatcttgctgacgcacttggcccgc
acgcaccaccacttggtgccgccgccggactacgagacaaaggaggagacaaaggagaca
aaggagacaaacgacagcaacaacgacaacagcaacagcaacaacgacagcagcaacagc
aacaacgattccagcgggaactcctccgagcgctgcttcgggtgtcttgcccagggcgac
ggggcgctcggcgcccgctacgcttgcgcggcctgtggccagcgcttctgcatcgactgc
gacgtgtttgtgcacgaggtgctccacaactgtccgggctgcgaggcccgtgcggcatga
DBGET
integrated database retrieval system