Clavispora lusitaniae ATCC 42720: CLUG_03517
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Entry
CLUG_03517 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLUG_03517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clu03400
]
CLUG_03517
DNA repair and recombination proteins [BR:
clu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CLUG_03517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad4
BHD_1
BHD_3
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
8496707
NCBI-ProteinID:
XP_002616276
UniProt:
C4Y5T3
LinkDB
All DBs
AA seq
1056 aa
AA seq
DB search
MSVNPLLKKMVRQSVKENPIRAERRKRRAAKPKEQEIVTISSSSTSSDDDDDDLEDVDLS
GADVSSREVTQTPDESAAEEVDDFQDLEDVDLEAAFAETPSPANETLTFTINTQEQPVKK
KAKKHTPISREERQQRKLIHKLYIVSMVTHGEIRSRWCNDPFFKSLADKMVPQVIRNLLD
QSGKSGQDHIKGRKFIDGLQKLLHLYSQRFKVTCQGLVRKDWGDLQQEQNYTEKNVNRAK
FKRLVSQLQGSRDIGAQGFVALLRACGVHARLVFSLQPPDFRSVSQAQSTKAKAAAEEKE
KKPKSEFDPVFIPNAKREVLTSIRAGATSSEPLRRQYNFPMSKYPVFWVEAWNKYNRKWI
SIDPIVFQSIEVCPMRKRCRFEPPGTEKTHQTMYVLAFDRYGRVKDVTRRYTQYYNAKVS
KKRIDSASDEDEHWYQMLLRAASQKSNKFQEAEILESKEFYDRDICEGIPKSKADFKNHP
VYALESQLRQDEVIYPKDNTSKCGTFRSITKSHIEPIYKRSHVHRLRTAKAWHMKGRLLK
MGAQPLKTKASNVIMTNDETTDDDGQVRLYADFQTELYIPPPIVDGKITKNAFGNVEIFT
ATMIPENGYLVKLSETMPMKLLEKAARDVLHIDYAKAIVSFDFGKKGTTTPKEGGILIDV
QYKEAMHLVLNGLVEIQEEEKRKAVELNALRCWKFFLAKLRIVRRLDSEHGEVEKRKFQE
EDSDEEEGYFSVGSEEAGSDDNYVPRKRRRLSVEPENNFNHSDDLGGGGFFSETGFNGNT
ISEDRNQNYAELNEGGFIIEEDNLENDESDGGGFIVEDDNERTAKVFESHEGGFLVNPDL
GTAKSVPVDERSDPMRDTNSETLQDDTDKELTRKATFDFPTESSKDEKEIHQNYGTVQSS
DTLSGYREENEQVAKIEPDLVLARANSIEAHQAHEQVCKHENDGASNGPENEGASDWMAC
NYSNQTPRTAVSLKNSSTSTRDADVNNGNGITEFHNITLETPPLDKFRKVESDADPCHAE
DLEDAITSGNTNQSEQLDPRIEQEEAEFGFEYSDSE
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaatcctcttctcaagaaaatggttcggcagagcgtaaaagaaaaccccata
cgcgccgaaaggcgaaagagacgagcagccaaaccaaaagaacaagagatagtcactatt
tcctcctcctcaacttcctcagatgacgacgacgatgatcttgaggatgtagatttgagt
ggagctgatgtctcatcgcgtgaagtcacgcagaccccagacgaaagtgctgccgaagaa
gtagatgatttccaagatttggaggatgtggatttggaagcagcttttgctgagacacct
tctcctgcaaacgagacactcactttcaccatcaatacacaagaacaaccggtgaagaag
aaagctaagaaacacacgccaatctctagagaagagagacaacagcggaaacttatccac
aagttgtatattgtatcgatggtaacccatggtgagataagaagtcgatggtgcaatgat
ccttttttcaagtccctcgctgataaaatggtccctcaagtcatacgcaatttgcttgat
cagagtggaaagtctggccaagatcatataaagggccgtaaatttatcgatggccttcag
aagctactccatctttactcgcaaagattcaaggtgacttgccagggcctagtgcgcaaa
gactggggtgatctacagcaagagcaaaattataccgaaaagaatgtgaaccgcgctaag
tttaaaagattggtttctcaactacaaggttcccgagatattggggctcaggggttcgtt
gcattattacgggcgtgtggcgttcatgctcgtctagtattctcccttcagcctccagat
tttcgctccgtgtcacaagcacaatcgacaaaagcgaaggccgccgctgaagagaaagaa
aagaaaccaaaatcagagtttgacccagttttcatcccaaacgcgaaaagagaggtactc
acaagcataagagctggggctacttcactggagccattgcggcgtcaatacaactttcca
atgtctaagtatcctgtgttctgggttgaagcatggaacaaatataatcgaaagtggata
tccatagacccaattgtgtttcaaagcatcgaagtttgccctatgcgcaagcgatgtagg
tttgaaccaccaggtacagagaaaactcaccagactatgtatgtgctagcatttgaccga
tatggaagagtaaaggatgttacaaggcggtatacgcaatattataatgcaaaagtgctg
aaaaaaaggattgactctgcgtctgatgaggacgagcattggtatcaaatgcttcttaga
gcggcttcacaaaaaagcaacaaatttcaagaggcagagatactcgaatctaaagagttt
tatgatcgagatatttgcgaaggtatcccaaagagcaaagcagacttcaaaaatcaccca
gtgtacgcattggaatcccaacttcggcaagacgaggtcatctatccaaaggacaataca
agtaaatgtgggactttcagatcgatcacaaaatcgcatatagaaccgatctataagcgc
tcacacgttcacagacttcgaactgctaaagcgtggcatatgaaaggacgactcctcaaa
atgggagcccagcctttgaaaacgaaagcctctaacgtgattatgactaatgatgaaacc
acagacgatgatggacaagtacgactttatgcagatttccaaacagaactatatatccca
ccaccaattgtggatggcaagatcaccaaaaatgcatttggcaatgtggaaattttcaca
gccacaatgatccctgagaacggatatttggtcaagctctcagaaactatgcccatgaaa
ctacttgaaaaagcagcgagagatgttctacatattgattatgcaaaggcaattgtttcg
tttgattttggcaagaagggcacaacaactccgaaggaagggggtattttgatcgatgta
caatacaaagaagctatgcatctcgttttgaatggcttggttgaaattcaagaagaagag
aaaagaaaggccgtggagctcaatgcgcttcgctgctggaagttcttcttagcaaaactt
cggattgtgcgccgacttgatagtgaacatggagaagtcgagaaaagaaagtttcaggaa
gaggattcagatgaggaagagggatactttagtgtgggaagtgaagaagcagggtctgac
gataactatgttccgcgaaagcgacgtcggttaagtgtagagccggaaaacaactttaac
catagtgacgatctaggtggaggaggcttcttcagtgaaacaggtttcaatggtaacact
atttctgaagataggaaccaaaattatgctgagttaaacgagggaggctttattattgaa
gaagataatttagagaatgatgaatctgatggaggtggtttcattgttgaagatgacaat
gaaagaactgccaaagtctttgaatcccatgagggaggattcttggttaaccccgacctt
ggtaccgcgaaatcggttcctgtggatgaaaggtcagatcctatgagagacactaattcg
gaaactctacaagacgatacggacaaagaattgaccagaaaagcaacattcgatttcccc
accgagtctagtaaagatgaaaaagaaatacatcaaaactatggcacagttcaaagtctg
gatactttgtccggatacagagaagaaaacgaacaagttgcaaaaatcgagcctgattta
gttcttgcacgcgcaaacagtatagaagctcatcaggcacacgagcaagtttgcaaacat
gaaaatgatggggcaagtaatggaccagaaaacgaaggtgcaagcgattggatggcatgc
aattatagtaatcaaactccgcggactgcggtatctctaaaaaattcaagtacaagcacc
cgcgatgctgacgtgaataatggcaacggaattacggaatttcacaatatcactctagag
acgccaccattggacaaatttcgtaaagtggagctggatgcagatccttgtcatgcagag
gatttagaggatgcgataactagtggcaatacgaaccaaagtgagcaactcgatccgcgg
attgagcaagaagaagccgaatttgggttcgagtatagtgattcagaatag
DBGET
integrated database retrieval system