Clavispora lusitaniae ATCC 42720: CLUG_03564
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Entry
CLUG_03564 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLUG_03564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_03564
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CLUG_03564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
ParM_N
Motif
Other DBs
NCBI-GeneID:
8497185
NCBI-ProteinID:
XP_002616323
UniProt:
C4Y5Y0
LinkDB
All DBs
AA seq
355 aa
AA seq
DB search
MSEPPQHAVFPPDVLARIAPDVSLQRHLSLGLRPCLRGFEEFRPLLASPGTLNSYGPNIV
VGSSTVKNGNTHILCEITMGITESSGPDELLASDTGNPSYSSVYPVVEVARGRSGAPSDE
EMILSQKLYNHILYSRILPSASLRMVPGYQITDEASNTTSIVYPDDSSMDKTDLESLSST
INITQKRYKYALYAHIKVFSRSGPLFDAVQHSLMCALQNVKLPRIYMAESGIDPNVKVPV
RSRKNFGHLNQSSGLFHIDSNWALAQPVNLSLEDIGISSSFGLIELEEEANKSVLLADLE
GEAEEFCAESQMTIVSTGKKLKHVSINGGGANISLETIQKAIAISNSRAIALKKV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacctccacagcacgcggtgtttcctccggatgtcctagcacgcatcgcaccc
gatgtatctcttcaacgccatttgctgttgggtcttcgcccctgcttgcgtggctttgaa
gaatttcgcccattgttggcatcgccaggtacactcaatagttatgggccaaacattgtt
gtggggctgtctacggtgaagaacggcaacacacacatattgtgcgaaatcaccatggga
attaccgaactgagtggaccagacgagcttcttgcctctgatactgggaaccctctgtac
tcatcggtgtatccagtggtggaggtggctcgtggccgcagtggcgctcctagtgacgag
gagatgatactctcacagaagttgtacaatcacattctttatctgcgaatcttgcccctg
gccagtcttcgaatggtgccaggataccagatcaccgacgaagcgagcaacaccacttcc
attgtgtatcccgatgactcttcgatggataagacagaccttgaaagcctcagcagcacc
atcaatatcacacagaagaggtacaaatacgctttgtacgctcacatcaaggttttctcg
cgttcgggcccacttttcgacgctgtgcaacattccttgatgtgcgctttgcaaaatgtc
aagttacctcgtatatacatggcagaatctggtattgaccctaacgtgaaagtgccagtc
cgttcgcggaagaactttggccatttaaaccagtcttcagggttgttccatatcgactct
aactgggcccttgcacagcctgttaacctttcgcttgaagacattggcatttcatcgagc
tttggactaatagagctcgaggaggaagcaaacaagtctgttcttttggctgatttggag
ggcgaggccgaggaattttgtgctgagtcacaaatgacaatcgttagtactgggaaaaag
cttaagcatgtcagcataaacggtggtggggctaatatctctttggaaaccatacaaaaa
gctattgcgatttctaacagcagagcaatagctttgaagaaagtttaa
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integrated database retrieval system
