Clavispora lusitaniae ATCC 42720: CLUG_03629
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Entry
CLUG_03629 CDS
T01149
Name
(RefSeq) similar to DNA-dependent RNA polymerase II second largest subunit
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03020
RNA polymerase
clu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLUG_03629
09124 Replication and repair
03420 Nucleotide excision repair
CLUG_03629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_03629
03400 DNA repair and recombination proteins [BR:
clu03400
]
CLUG_03629
Enzymes [BR:
clu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLUG_03629
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CLUG_03629
DNA repair and recombination proteins [BR:
clu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CLUG_03629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
MRNIP
Motif
Other DBs
NCBI-GeneID:
8496938
NCBI-ProteinID:
XP_002616388
UniProt:
C4Y645
LinkDB
All DBs
AA seq
858 aa
AA seq
DB search
MVNRLLLCALERKEPDDRDHFGKKRLDLAGPLLASLFRLLFKKLTRDIYNYMQRCVENDK
EFNLTLAVKSQTITDGLRYSLATGNWGEQKKAMSARAGVSQVLNRYTYSSTLSHLRRTNT
PIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTASEPILYFLEE
WGMEPLEDYVPSNSPDCTRVFVNGVWVGTHREPAQLVDTMRRLRRKGDISPEVSIIRDIR
EREFKIFTDAGRVYRPLFIVDDDPESETKGDLVLQKEHIHKLINSEYDEYDEESQANAYT
WSSLVNDGVVEYVDAEEEETIMIAMTPDDLEASKSSLSETQQKSLQLEEQELDPAKRIKP
TYTSSTHTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNYSVRM
DTMANILYYPQKPLATTRSMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMNQSSIDRG
LFRSLFFRSYMDLEKRQGMKALETFEKPSRSDTLRLKHGTYEKLDDDGLIAPGVRVSGED
IIIGKTTPIPPDTEELGQRTQYHTKRDASTPLRSTESGIVDQVLLTTNGDGAKFVKVRMR
TTKIPQIGDKFASRHGQKGTIGVTYRHEDMPFSAQGIVPDLIINPHAIPSRMTVAHLIEC
LLSKVSSLSGLEGDASPFTDVTAEAVSKLLREHGYQSRGFEVMYNGHTGKKLMAQVFFGP
TYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKE
RLMEASDAFRVHVCGICGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLFQELMA
MNISPRLYTERSGISVRV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacagattattgttatgtgcgttggagagaaaagaaccagatgacagagatcat
tttggtaagaaaagattagacttggccggcccattgttggcaagtttgttccgtctctta
tttaagaagttgacaagagatatttataactacatgcaaagatgtgttgaaaatgacaag
gaatttaaccttacgttggctgtcaagtcgcagactattactgacggcttgcgttactcc
ttggctactggtaactggggtgaacaaaagaaggccatgagtgctcgtgccggtgtctct
caagttttaaatcgttatacctattcctctaccttgtcgcacttgagaagaactaacact
ccgatcgggcgtgatggtaaaattgccaaacctagacagttacataacactcattggggc
cttgtctgtcctgctgaaacgcccgagggtcaagcgtgtggtcttgtgaagaacttgtca
ttgatgtcctgcatttctgttggtaccgcctctgaaccgattttatacttcttggaagaa
tggggaatggaacctttggaagattatgttccatctaactctcctgactgtacaagggtg
tttgttaatggtgtttgggttggtactcatagagaacccgcacaactagttgataccatg
agaagattgagaagaaaaggagatatttcacctgaagtatcgattatcagagacatcaga
gaaagagaattcaaaatctttactgacgctggtcgtgtttatcgtccattatttatcgtt
gatgatgacccagaatccgagacaaagggcgatttagtgttacagaaagagcacattcac
aagttgattaactctgaatatgatgaatatgatgaagaatctcaggcgaatgcttacact
tggtcttctttagttaatgacggtgttgtggagtatgttgatgcagaggaggaagaaacg
attatgattgctatgaccccagatgatttggaagcctcaaaaagttctttatctgaaact
caacagaagagcttacaattggaggagcaagagcttgaccctgccaagagaatcaaacct
acttatacttcatcaactcacactttcactcactgtgagattcacccatcgatgattttg
ggtgttgctgcatctattattccattcccagaccacaatcaatctccacgtaacacatac
cagtctgctatgggtaagcaagctatgggtgtctttttgacgaactactctgtcagaatg
gacacgatggccaacattttgtactaccctcaaaaaccattggcaaccactagatccatg
gaatatttgaaattccgtgaattaccagccggtcagaatgctattgttgctattgcatgt
tactccggttacaatcaagaagattccatgattatgaatcaatcttctattgacagaggt
ttgttcagatctttgttctttagatcgtacatggacttggaaaagaggcaaggtatgaag
gcattagaaactttcgaaaagccttccaggtctgacacattaaggttgaaacatggtact
tatgagaagttggatgacgatggcttgattgcgcccggagtccgtgtgagtggagaggat
atcatcattggtaaaactacaccaattccgcctgacactgaggaattaggtcagagaact
caataccacactaagagagatgcatctactcctttgagaagtacagagtcgggtattgtt
gatcaggtcttgttgaccactaatggtgatggtgcaaaattcgttaaggtgagaatgaga
acgacgaaaatcccccaaattggtgataagtttgcctccagacacggtcagaagggtact
attggtgttacttatagacacgaagacatgcctttcagtgcccaaggtattgtccctgat
ttgatcatcaatcctcatgccattccatctcgtatgacagttgcacacttaattgagtgt
ttattatctaaagtctcctccttgtcgggattggaaggtgatgcatcgccatttactgat
gttacggctgaggctgtgtcgaagttgttaagagaacacggatatcagtctagagggttt
gaggttatgtacaatggtcacacgggtaagaagttgatggcccaagtgtttttcggtcca
acttactaccaaagattgagacatatggtggatgataagattcatgccagagctagaggt
cctgttcaggtgttgacaagacaacctgttgaaggtagatctagagatggtggtttacgt
ttcggtgagatggaaagagattgtatgattgctcacggtgcggccggtttcttgaaggaa
agattgatggaagcatcagatgcctttagagttcatgtttgcggaatctgtggtttgatg
tctgtgattgctaacttgaagaagaaccagttcgagtgtagatcgtgcaagaacaagact
aatatctaccagattcacattccttatgctgccaaattgttattccaagaattgatggca
atgaacatttcgccaagattatacacggaaagatcaggaattagtgtccgtgtctga
DBGET
integrated database retrieval system
