Clavispora lusitaniae ATCC 42720: CLUG_03708
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Entry
CLUG_03708 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03008
Ribosome biogenesis in eukaryotes
clu03013
Nucleocytoplasmic transport
clu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUG_03708
03015 mRNA surveillance pathway
CLUG_03708
03008 Ribosome biogenesis in eukaryotes
CLUG_03708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_03708
03009 Ribosome biogenesis [BR:
clu03009
]
CLUG_03708
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLUG_03708
mRNA cycle factors
Stress granule specific factors
CLUG_03708
Ribosome biogenesis [BR:
clu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CLUG_03708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
RRM_9
TAP_C
LRR_NXF1-5
LRR_4
Motif
Other DBs
NCBI-GeneID:
8497168
NCBI-ProteinID:
XP_002616467
UniProt:
C4Y6C5
LinkDB
All DBs
AA seq
620 aa
AA seq
DB search
MMSYRGRGRGGFGHNNNFNRNDTQGAGNNNVEMEIYGWNGSTPGDCVAFIARKCKITLTN
YSVNTANGALRGFVRSENEAKDLLQWSGVRFAGSPLKISKVPAPNAGFNQPGGSAIPTNS
NTSSQNTIETLTMFLKSRYDAQNKLLNLSAVQQDSTLSAKGFFGTISTSSKFFPALMKIA
KDLKLEVTSADLSNNNLNDSSTISTLAHSFPMLRNLSLQNNKFTKIKAFESWKKKFNYLR
ELILTGNPLLNTTNPNDVIHIKQEVLKIFPRLVVFNGEVIRNEQLLNQNLTFPFGDPNAM
FFQDNEVQNISTNFITNYFNLWDMNRADLMVLYQNESQFSLQVDATSPHTLDSKGPPDFG
YYLPSSRNLTRISSAKVRMGRVAQGQEQIFKLFSQIPKTKHDILGKPDNYSVECYRLQAL
GAICITIHGKFEETAAPDNLDNLNQSSSGGRSRNSFQKKHKIALGSKSFDRTFIVIPGPN
ASMIVASDLLCIRVEADSDAFKPPANVLPAVNTSQAPSVSPTPVQGGINPTGTLAGPQTQ
PILNNATPPPNGPNVAALPAELNANLNQMQQEFLVKILVETKLSMQYALMLCQQSNWDYQ
QCIVNFKNSASSLPPDAFAQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttatcgaggcagaggaagaggtggatttggccacaataataacttcaataga
aatgatacacagggcgctgggaacaataatgtggaaatggagatatatgggtggaatggg
tctacacctggagattgtgtcgctttcatagcaagaaagtgcaaaattacattgacaaat
tactcagtcaacacagccaatggtgcattacgtgggtttgtgaggtctgagaatgaagca
aaggatttacttcaatggtctggagtccgttttgccggaagtcccttgaagatctcaaag
gttccagctcccaatgctggtttcaatcaaccaggaggttcggcaattccaactaattcc
aatacttcaagtcaaaataccatagaaacattgacaatgtttctcaaatcaagatacgat
gcacagaacaagctcttgaacctcagcgctgttcaacaagatctgacattatctgccaaa
ggattttttggcacaatatccacatcctctaagttctttcctgctttgatgaagattgca
aaagatttgaaattggaagtcactagtgcagacctctccaataacaatctcaatgactcg
agcacaatatctacattggcccattcttttcccatgttgcggaatttgtccttgcagaac
aacaagttcactaaaatcaaggcgtttgaatcgtggaaaaagaaattcaattacttgaga
gagttaattcttacgggcaatcctttactaaataccacaaacccgaacgatgtgattcac
atcaagcaagaagtgttaaaaatctttcccaggttggtcgtgttcaatggggaggttatt
agaaatgaacagttgcttaatcagaacttgacgttcccatttggtgatccgaatgcgatg
tttttccaagataatgaagttcagaatatctctaccaacttcatcacaaactactttaac
ttgtgggatatgaacagagcagatcttatggttttgtatcagaatgaatcacaattttct
ttacaagtggatgcgactctgccccatactttggattctaaaggcccaccagattttgga
tactatcttccgctgtcaagaaatttgacgcgaatctcttcagcaaaagtacgcatggga
agggttgcgcaaggtcaggagcagatattcaagcttttctcacagattcccaagacgaag
cacgatatattaggcaagccagacaattacagtgtcgagtgctatagattgcaggctctt
ggggctatttgcatcacaattcatgggaaatttgaggaaactgctgctccagataacttg
gataacctcaaccagagttcgagtggcggtcgcagcagaaattcattccaaaaaaagcat
aagattgctttgggaagcaaaagcttcgatcgcactttcattgtgatcccaggacccaat
gcatcaatgattgtggctagcgatctactttgcattagggttgaagctgattcagacgct
tttaagcccccagcaaatgttctcccggcagtgaatacttcgcaagctccttccgtctct
cccacgccagttcagggtggcatcaacccgacaggaacgttagcggggccacagacacaa
cccatccttaacaatgctacaccgccccctaatggaccgaacgtggctgctttacccgcg
gaactaaacgctaatttgaatcaaatgcaacaggaatttcttgtgaaaattctcgtggag
acaaagcttagcatgcaatatgctcttatgctttgtcaacaaagcaattgggactatcag
caatgtattgtgaatttcaagaattcggcatcttcacttcccccagatgcttttgcacag
tga
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