Clavispora lusitaniae ATCC 42720: CLUG_03974
Help
Entry
CLUG_03974 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03008
Ribosome biogenesis in eukaryotes
clu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLUG_03974
09123 Folding, sorting and degradation
03018 RNA degradation
CLUG_03974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_03974
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_03974
03009 Ribosome biogenesis [BR:
clu03009
]
CLUG_03974
03016 Transfer RNA biogenesis [BR:
clu03016
]
CLUG_03974
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CLUG_03974
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
CLUG_03974
Ribosome biogenesis [BR:
clu03009
]
Eukaryotic type
Pre-60S particles
RNases
CLUG_03974
Transfer RNA biogenesis [BR:
clu03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
CLUG_03974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
Motif
Other DBs
NCBI-GeneID:
8496932
NCBI-ProteinID:
XP_002616733
UniProt:
C4Y740
LinkDB
All DBs
AA seq
483 aa
AA seq
DB search
MTCVILKRDTETVTMRLSSALLRQKRLPTFVKKLSAPTWKVFHGCYCITTKGVPRGNGIF
LTTTPPLSQISPIYVKSWARKESNSILGEPFNPYEQLMAVLPAASGHTLPEVFRSLMSHP
DSEIIDFYPETFQIDMNGAKMSWQGIALLPFIDEKRLLTAVRAKYSLLTDDERERNTNKK
AQLFISSGNANYKKFIQACEEDREISFGAHRTGLAGKIRPLLSFSPDGETLFPLKEGELP
NVPNSAYFQAWYDFPESYPGKSMLLNGYIPHEKVLDESDKYTVLGRSRPNYNFQNVSSYV
NHGPCGEKDFLMYSMRRGGYRALLEMGQNANQTRNQGRSNHSQGNGNYGGKHYGNNHHGN
SNYGNNYGNQYGNYGNNQYGNQNYGNQNYGNNQYGNQQYGNNQYGNQNQYGNQYGNQNQY
GNQYRNNYGNNQYGNNQYQGQYGHQNQSRTDQYGSHSYSNHNQNTHGRSNYQSNRGGRSG
YRR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcgttatcttgaagcgggatacagagaccgttactatgaggctaagttcggcg
cttcttcgccagaagaggttgccgacattcgtaaaaaagttgtccgcgcctacttggaag
gtatttcatgggtgttattgtattactaccaagggtgtccctcgtggcaatggtattttc
cttaccactacgccccctttgctgcagatttcaccaatctacgtgaaatcgtgggcgagg
aaggaatcaaattcgattttgggtgaaccattcaatccgtatgagcaacttatggctgtt
ttgcctgctgcgtccggccacacgttgccagaagtgtttcgcagcttaatgtctcatcca
gacagtgagattatcgacttttaccctgagaccttccaaattgatatgaatggggctaaa
atgagctggcagggtattgcattgttgccgttcattgatgaaaaacgtttgcttactgca
gttagagcaaaatattccctattaacggatgatgagcgagagcgcaacaccaacaaaaaa
gcgcaattgttcatttcaagtggtaatgcgaactacaagaagtttatccaagcatgtgag
gaggaccgtgagatttcattcggtgcccacagaacaggcttggctggcaaaatacgccct
ttattatctttttcgccagatggagaaacattgttccctttgaaggaaggtgagttgccc
aacgttcccaattctgcttacttccaggcttggtacgactttccagaactgtacccaggt
aagtctatgttattgaacggatacataccacatgaaaaagtgcttgatgaactggacaaa
tacacagttctcggtcgcctgagaccaaactacaacttccagaatgtgagtagttatgtg
aatcatggaccgtgcggagaaaaggatttcctcatgtactcaatgcgccgtggcggttac
agagcattacttgagatggggcagaacgcaaaccagacgaggaaccaaggcagaagtaac
catagtcaaggaaacggcaactacggaggaaagcactacgggaacaatcaccatggaaac
agcaattatggaaataactatggaaaccaatacggaaactatggcaataatcaatacggg
aaccaaaactacggcaaccagaattatggtaacaaccaatatggtaaccagcagtatgga
aacaaccaatacggtaaccagaatcaatacgggaatcagtatggaaaccaaaaccaatac
ggaaatcagtatagaaacaactatggaaacaaccaatatggaaacaaccaataccagggt
caatatggccaccaaaaccaaagccggacagaccagtatggaagccactcttactccaat
cacaaccaaaatactcacggtcggctgaactaccaatctaaccgtggcggcaggtctggc
tacagacgttaa
DBGET
integrated database retrieval system