Clavispora lusitaniae ATCC 42720: CLUG_04084
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Entry
CLUG_04084 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLUG_04084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clu03009
]
CLUG_04084
Ribosome biogenesis [BR:
clu03009
]
Eukaryotic type
Pre-60S particles
RNases
CLUG_04084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
HEPN_RES_NTD1
XRN_N
Motif
Other DBs
NCBI-GeneID:
8496520
NCBI-ProteinID:
XP_002616843
UniProt:
C4Y4U6
LinkDB
All DBs
AA seq
653 aa
AA seq
DB search
MTNNDEQLSQTAARLSISTDDKSVIKQVRDFLADQSPKRRDSAVSITSIDEEPKHNGVIE
PPNGNREVSENVSSKHRKKARRRRRSSAQSSSEPRAEKVHKKKLKRDNEPVSIVYDESCG
KALAMAQFRTLLHSIVSGTPAQGQRLVKVNKPTKVTKVVFAFVPGLRPSDFNVVKSSEEP
LLQPMVKENETKMAFFYNVFDYLMPLTISGSKDSIYSCSQTLINFGLSKKEKKQRAEESR
QTKLVLYDLLLTRDQMEKSNYPIHSSQSGEESVEEGWVETTNFEHDGSHTFALDCEFCES
SSGKVLTRISIVNFQGETVYDTYVKPKEEITDYVTRYSGITEEILKGVTTTLADVQAKVL
DTVSSSDILIGHSLDSDLRVLKVKHPRVIDTAIIYDHHRGPPSKPGLKWLSATFLSRSIQ
QGEQTGAGHSSVEDSLACLDLVKMKLVEGPEFGRVPREVTLFEKLREEKVDKLSTIIDHS
PALWGPYIWEQPNLRVLSVSDDDEVAEEAVNAVKDSDLLLLRFKEIDFNSGAVAVPSSFK
GKLYSELDNTRHAKATLTEENRLELLGRLNERLQKVFDSLPSDSVFIVASEGSDSREMMN
LQRVRRNFQNLERSGADLSSLSPEECWDFDKLSALHRATTEARKGIAFVGRKE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataacgatgagcagctatcgcaaacagcagctcgtctatccatatccacagat
gataaaagtgtgatcaaacaggttcgagactttttggccgaccaatcgccgaaaagacga
gattctgcagtttccatcacctcgatcgacgaagaaccaaaacacaatggtgtaatcgaa
ccacccaacggaaaccgggaagtttccgaaaacgtttcttcaaaacatagaaaaaaggct
agacgcagaagacgatcctctgctcagtctagttccgagcctagagcagagaaggttcac
aagaagaagcttaaaagggataacgaacccgtgagcattgtttacgatgaaagttgtggt
aaagctctagccatggctcaatttcggactcttcttcattccatcgttctgggcacacct
gctcagggccagagattagtgaaagtcaacaagcccacaaaggttacaaaggttgttttt
gcttttgtgcccggtttgcggccgagcgatttcaacgttgttaaatctagcgaagagcct
ttgttgcagccaatggtcaaagaaaacgagacaaaaatggcatttttctataatgtgttt
gactatctcatgcctttaactataagcgggagcaaggactcaatttatctgtgctcgcaa
acattgatcaattttggtctttcaaaaaaagagaaaaaacagagggcagaagagctgcga
caaacaaaacttgtcttgtacgatctacttttaacccgggaccaaatggaaaagtcaaat
taccctatacatagtctgcagtctggggaagagtctgttgaggaaggatgggtcgaaact
acgaattttgagcatgatggatcgcacacatttgctctagactgcgagttttgtgaatct
ctgtcaggaaaagtattgactcgaatttctatcgtcaatttccaaggtgaaactgtgtac
gacacgtacgtgaaacccaaggaagagatcacggattatgtgacgagatattctggtatc
actgaggaaatattgaagggcgtgactacaacactagcagacgtgcaagcgaaagttttg
gatacagtttcgagcagtgacattctcataggccattctttggactcagatttacgtgtt
ttgaaagtaaagcatccacgtgtaattgatactgccatcatttatgatcaccataggggc
ccaccctccaagccgggtttaaagtggctctctgccacttttcttagccgttccattcaa
caaggcgaacaaactggtgcagggcactcttctgtggaagatctgttggcatgtttggat
ttggtcaagatgaagttggtcgaagggcccgaatttggcagagttcctagggaagtgaca
cttttcgagaagctcagggaagaaaaagtagataagttgtcgaccataattgaccactcg
ccggcattatggggcccatatatctgggagcagccaaaccttcgcgttttgtcagtttca
gacgatgatgaagtcgctgaagaagctgtaaatgcggttaaggattcagatttattactt
ttgagattcaaggaaatcgatttcaactcaggtgccgttgctgtaccctctctgtttaag
ggcaaattgtactcagaattggacaacacaagacatgccaaggcaacactaacagaagaa
aatcgtttagaacttcttggccgattgaatgaaagactccaaaaagtatttgatagcctt
ccgtcggattctgtgttcattgtggctagcgagggaagcgactcgagagaaatgatgaac
ttgcagagggtgcggcggaatttccaaaaccttgagagaagcggagcggacttgagctcg
cttctgccggaagaatgctgggactttgataagctatctgctttgcatagagccactacc
gaagctcgaaagggcattgccttcgtcggacgaaaagagtaa
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