Clavispora lusitaniae ATCC 42720: CLUG_04263
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Entry
CLUG_04263 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
clu
Clavispora lusitaniae ATCC 42720
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clu03009
]
CLUG_04263
Enzymes [BR:
clu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLUG_04263
Ribosome biogenesis [BR:
clu03009
]
Eukaryotic type
Pre-60S particles
Helicases
CLUG_04263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Pet20
Motif
Other DBs
NCBI-GeneID:
8496135
NCBI-ProteinID:
XP_002615381
UniProt:
C4Y7T5
LinkDB
All DBs
AA seq
545 aa
AA seq
DB search
MCRIDSTGPVDGAADFKPEPVKKGHMLAVVVSPTRELASQIQRVFDSVLDFLPEEKTKIN
TQLVVGSLSSVREDLETLLLQRSHIVIATPGRLLDLLSSEKVKTSSVEVAVLDEADKLLD
MSFETDVLSILKQLPRQRRTGLFSATLSAAGDKIFRTGMMNPVKVAVKSKNSKKAAPTSL
TIQYMLVDAEKKLTTMLKLAADYKFKKCIVYFPTCTSIKLFYSMIENWKKATSFEAKFYS
LHGQLSTNARLKTLQNFTEGDTAESKHILLTTDVAARGIDIPEVDLVIQLDPPTDPDVFL
HRCGRTGRANKVGRALVMLNINSREEDYVDFMEVKGVEMSQMNVPQDEKLHQEFQQQTKA
FMLADRARHELAVKSYVGFMRYYQKHLASSIFRMQSIDYLGLAKMYGLLRLPKMPETKYI
PAEKMPEDGWLIPEPLDMDKYAYADSSKEESRLEHLEEEKQKKIKDAKARKLLKKKNEAW
SVKVDTKESKSVRREKNKRKREAIEKQIMEESSDDEETQQDWKDLVRSNKKSKGDSNMQG
SFDDM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcgaatagactctacgggcccagttgacggtgcggcagatttcaagcctgaacca
gtgaaaaagggccacatgttggccgtcgtggtgtctccgacacgagaacttgcgagccag
atccagagagttttcgatagcgttcttgactttttgcccgaggagaaaacgaagattaat
actcaacttgttgttggctcgctcagtagtgtgagagaagacttggaaacgcttcttttg
cagagaagccacattgttattgccacgccaggccgtcttcttgacttgctctcgtccgaa
aaagtgaaaacgtcttcggtggaagtggctgtcttggatgaagccgacaaacttttggac
atgtcttttgagactgatgtattgtccattttgaaacagctccccagacaaagaagaaca
gggcttttctctgccaccctcagcgctgctggtgacaaaatcttccgcacgggaatgatg
aatccagtgaaagtagctgtcaagtcgaaaaactcaaagaaggcagctcccacgtccttg
acaatccagtatatgcttgtggatgcagagaagaagttaacgacaatgctcaagttagct
gcagactacaagttcaaaaaatgtattgtgtactttcccacatgtacatccatcaagctt
ttctacagtatgattgaaaactggaagaaagcaacgctgtttgaggcaaagttctactcg
ttgcatggccagctttccaccaatgccagattgaagacgcttcaaaatttcactgaaggt
gacaccgctgagtcgaaacatattttgttgaccacagacgttgctgctagaggtatagac
attcccgaagttgatttggtcattcagctagatcctcctactgatccagacgttttcttg
cataggtgtggtagaaccggaagagccaataaggtcggccgtgccttagtgatgcttaat
attaattctcgtgaagaagattacgttgattttatggaagtgaaaggtgttgaaatgtcc
caaatgaatgtgcctcaagatgaaaaattgcatcaagagtttcaacagcaaaccaaagcg
tttatgctagccgatagagctcgccatgagcttgctgtgaagtcttatgttgggtttatg
agatattaccagaaacaccttgcatcttccattttcagaatgcaatcgatagattacttg
ggcttggcgaaaatgtacggattgcttcgtttgcctaaaatgcccgaaacaaagtatatt
cccgccgaaaaaatgcctgaagacggctggttgatcccagaacctttggacatggataaa
tacgcatatgccgacagttcgaaggaagaatcacggttggagcatttggaagaggaaaag
cagaaaaaaatcaaagatgccaaagcccgtaaattgctcaagaagaaaaatgaagcttgg
tctgtgaaggtggatacgaaagagtcgaaaagtgtacgtcgggagaaaaataaaagaaag
agagaagccattgaaaaacagatcatggaggagtcctcggacgatgaagaaacacagcaa
gattggaaagatttggtccgactgaataaaaagagcaaaggagactcaaatatgcaaggt
tcgtttgatgatatgtga
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