KEGG   Clavispora lusitaniae ATCC 42720: CLUG_05076
Entry
CLUG_05076        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03022  Basal transcription factors
clu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CLUG_05076
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUG_05076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clu03021]
    CLUG_05076
   03036 Chromosome and associated proteins [BR:clu03036]
    CLUG_05076
   03400 DNA repair and recombination proteins [BR:clu03400]
    CLUG_05076
Enzymes [BR:clu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     CLUG_05076
Transcription machinery [BR:clu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CLUG_05076
Chromosome and associated proteins [BR:clu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CLUG_05076
DNA repair and recombination proteins [BR:clu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CLUG_05076
SSDB
Motif
Pfam: DEAD_2 HBB DEAD ResIII SLFN-g3_helicase nSTAND3
Other DBs
NCBI-GeneID: 8495614
NCBI-ProteinID: XP_002615061
UniProt: C4YAD8
LinkDB
AA seq 439 aa
MKFYIDDLPVLFPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ
MHYPEHRKIVYCSRTMSEIEKALVELHSLMEYRASELGYVEEFRGLGLTSRKNLCLHPTV
SKERKGAVVDEKCRRLTNGQLKQKLEQQNVSQDEMRNHSDQYGLCSFHEKLYDYDQHDLI
PSGVYSFEALLDYCKQAGTCPYFTVRRMLSFCNIIIYSYHYLLDPKIAERVSRELSKDSI
VIFDEAHNIDNVCIESLSLYLTDDTLKRAGRGANKLAEAVDEMKAQDSAKLQDEYEKLVE
GLRQNEIARDEELFMANPALPQDLLEEAVPGNIRKAEHFLSFLKRFIEYLKTRMKVLHVI
SETPVSFLQHLKELTFIERKPLRFCSERLSLLVRTLDLADVDDLNALKDIATFATLVSTY
DTGFQLILEPFETEGADSA
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgaagttctatatcgacgacttgccggtgctttttccgtacccacggatctaccccgag
cagtatgcttacatgtgcgatatcaaaaagaccttggatgtgggtggaaactgcattttg
gaaatgccttcaggaactggcaaaaccgtctcgcttctttctcttaccgtggcgtaccag
atgcactatcccgagcaccgcaagattgtctactgctcgcggacaatgtcggagattgaa
aaggcgttggtggagttgcatctgctcatggaatatcgtgccctggaacttgggtatgtg
gaagagttccggggccttggactcacatccagaaagaacttgtgcttgcatccgaccgtg
tcgaaagaaagaaaaggggcagtggtggacgaaaagtgccgccggctcaccaacggacaa
ttgaagcagaagcttgagcaacagaacgtttcacaggacgagatgcggaaccactctgac
cagtacgggctatgctcgttccacgagaaattgtacgactatgaccagcacgacttgatt
cccagtggcgtttattcgttcgaggcgttgcttgactactgcaagcaggccggaacgtgt
ccttacttcacggtcagaagaatgctttccttctgcaacatcatcatctactcgtaccac
taccttctcgaccctaagattgccgagcgtgtctctcgtgagctcagcaaagatagcatt
gtcattttcgacgaggcccacaacatcgacaatgtgtgcatcgaatcgctctcgctatat
ttgaccgacgacacgctaaaacgagctggccgaggcgctaataagttggccgaggcggtc
gatgaaatgaaggcccaggatagcgccaaacttcaggacgaatatgaaaaacttgtcgag
ggacttcgacagaacgaaattgcacgagacgaagagcttttcatggcaaacccggccttg
ccgcaagaccttttggaagaggctgtgccgggaaatatccgaaaggcagagcatttcctc
tctttcttgaagcggtttattgagtatttgaaaacacgtatgaaggttcttcatgtcatc
agtgaaaccccagtcagcttcttgcagcatctcaaagaactcacattcatcgaaaggaag
cctttgcgcttttgcctggagcggctctccttgcttgtgaggacgctagacttagccgat
gttgatgaccttaatgcattgaaggatattgccacattcgccacgttggtttctacgtac
gacactggttttcaacttatcttggagccgttcgaaactgagggggctgacagtgcctaa

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