Clavispora lusitaniae ATCC 42720: CLUG_05289
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Entry
CLUG_05289 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLUG_05289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_05289
03041 Spliceosome [BR:
clu03041
]
CLUG_05289
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CLUG_05289
Spliceosome [BR:
clu03041
]
Complex B
Other components
Prp19-related factors
CLUG_05289
Complex C
CLUG_05289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_N
HAT_PRP39_C
Suf
ARM_TT21
TPR_17
NRDE-2
GET4
Mad3_BUB1_I
DUF4472
Motif
Other DBs
NCBI-GeneID:
8495223
NCBI-ProteinID:
XP_002614511
UniProt:
C4YAR1
LinkDB
All DBs
AA seq
790 aa
AA seq
DB search
MDIASLVDPQNVHYEESLLKDPDNESLWLDYFESVQDDFRKSQFVLHRAVTQLPASTLLW
NAYLSLPWTPTDNEKLLSLYELALSVLNPTPSLWLRYLALAMESSPAEAVDFSFNKALMS
LDEQYHGPIWTKYLAFADTVRGKLGASIYRRFFAVCGRFSDGPDIMADVCILQIARFGEI
SSTKKLFNQLWEKKYSLSHLLSSVVLEYCKILRCDKNFGDTEYFESVVDKALLSFMDMGP
EFHLELASYYVSRKEFEKAHHQFQLGLNSADSVKQMTYLFSAYADFQHKELTQSELPEEQ
LMLRLDIYEKFLDNSSRLVNDVHLKKNPNNVDYWLDRAQLYEQANDKNQMLSTLVKAITS
INPLKTTSTRGKSLVDLWKVYANVYICQNDFETANIIFSKAIKSQFKTPEELAEIYITWT
ETLLQSYDDSVALENLERVLFADQDDVDYEDSSISVQRRLHKCTKLWEFYFDLLKSIFQD
DNDESILQKWSNAFDRMKSLRIISIRVVLDFADFLQEQKLWERSFSIYETGLSCFNAPQA
KYEIYKRYISRVLSYDRSNKEKIRDLFDHCISHHDIPGYLAKSIYEMYSEFEKQNGSIVK
SKNIIQQGISYLTSSFNSNTKRYTKTQLNQIADDKFELYKKLLSLTSDLKDAELQREVYS
ESIQDIHLSFSHVIDLGMEFISFEVKNNELHRVRALFKHLVGLRNPENPIMSTVWQQWET
FEVQNGNEASFKDMLRLRRRLIQESTERDTARDELNPMGFVKSLSTGNGSANAKSTEVSD
PNAIELDMDV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggacattgcctcacttgtggatccgcagaacgtacattatgaggagctgttgctaaag
gacccagacaacgagtcgctttggcttgactacttcgagctggtccaggacgatttccgc
aagtctcagtttgttctacatcgtgctgtcacccagctcccagcctccacgctcttgtgg
aatgcctatctcctgcttccttggacaccaacagacaacgaaaagcttctttccttgtac
gagcttgccttgctggttttaaaccccacgccttctctatggttgagatacctcgctctc
gcgatggagtcatctccagctgaagcagttgacttttccttcaacaaagcgctcatgagt
ctagacgagcagtaccacggacccatttggacaaaatacttggccttcgccgacactgtg
agaggaaaactcggcgcttcaatctacagacgctttttcgctgtttgtggtcgcttctcc
gatggaccagacatcatggcagacgtgtgtattctccaaattgccaggtttggcgaaatc
agctccacgaagaaactcttcaaccagttgtgggaaaagaagtatagtttgtcccacctt
ctaagtctggtggtgttggagtactgcaagattcttaggtgtgacaaaaatttcggcgac
acagaatattttgaatctgtggttgataaggctctcttgagctttatggatatgggaccc
gaattccacttagaactagcatcttattatgttctgcgaaaagagtttgaaaaggcccat
catcagtttcaacttggccttaactcagcagactctgtcaaacaaatgacatatttattc
agtgcatatgctgattttcagcacaaagagcttacgcagtctgaacttccagaggagcaa
ctaatgttgcgattggatatatacgaaaaatttctcgacaacctgtcccgactcgtgaat
gatgtccatctcaagaaaaacccaaataatgtggactattggctagatcgagcacaattg
tatgagcaagcaaacgataaaaatcaaatgcttagcactttggttaaggctattactagc
attaaccctttgaaaaccacctctacccgtggcaaaagtctagtggatttatggaaagta
tatgcaaatgtctacatttgccagaacgattttgagacagctaatattatattttcaaag
gccataaagtcgcagtttaaaacacctgaagagcttgcggaaatatacataacatggact
gagacactattgcaaagttacgacgatagcgttgccttggagaatttagaacgtgttctt
ttcgcagaccaggatgatgttgattatgaggattcttccatatcggttcagcgcagattg
cataaatgcacaaagctctgggaattctattttgacctcttgaaatctatatttcaagat
gataatgacgaaagtattctacagaaatggagtaatgcttttgaccggatgaaatccctt
agaatcatctccatcagagtggttctcgattttgcagattttttacaagaacaaaaatta
tgggaacgttccttttcaatttacgagacaggcttatcatgtttcaatgcccctcaagca
aagtatgagatatacaagcgatacatctcgagagtactctcatatgataggtcgaacaag
gaaaagatacgggatctttttgatcattgcatatcccatcacgatattcctggctacctt
gcgaaatcgatttatgaaatgtactctgaatttgaaaagcaaaacgggtcaattgtgaag
tcgaaaaatatcatacagcagggcatatcttaccttacttcatcatttaattcaaacacg
aagagatacacaaaaacacaactcaaccaaattgcagatgataagtttgagctatacaaa
aaactactttctttgacgtcagacttgaaggacgcagaattgcaaagagaagtgtactcc
gaatctattcaggacatccatttatcattttctcatgttattgacctcggcatggaattc
atctcttttgaagtcaagaacaatgagcttcacagagtgcgtgctttatttaaacatctt
gttggtctccggaaccctgaaaaccccatcatgtctacggtgtggcaacaatgggaaacg
tttgaggtacagaacgggaacgaagcttctttcaaggatatgcttcgactcaggcggaga
ctcatacaagagtcaacggagcgtgatacagctagagatgaattgaatccaatgggcttt
gtcaaaagcttgagcacaggaaacggaagcgcaaatgctaaatctacagaagtcagcgat
cccaatgcaattgaattggatatggatgtatag
DBGET
integrated database retrieval system
