Clavispora lusitaniae ATCC 42720: CLUG_05488 Help Entry CLUG_05488        CDS       T01149                                  Name (RefSeq) hypothetical protein   KO K14400   pre-mRNA cleavage complex 2 protein Pcf11 Organism clu  Clavispora lusitaniae ATCC 42720 Pathway clu03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:clu00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     CLUG_05488  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:clu03021]     CLUG_05488    03019 Messenger RNA biogenesis [BR:clu03019]     CLUG_05488 Transcription machinery [BR:clu03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CLUG_05488 Messenger RNA biogenesis [BR:clu03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      CLUG_05488 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Pcf11_C Pfc11_Clp1_ID CID zf_PCFS4 Motif Other DBs NCBI-GeneID:  8495069 NCBI-ProteinID:  XP_002614710 UniProt:  C4YBB0 LinkDB All DBs AA seq 565 aa AA seqDB search MVICPRDIYHVCATTPSPFSHFLPTMVFSPLVEDYATSLKELTFNSRPIIVNLTTIAKEN TDEADGILAAITHRIYHCIPEHKLFALYLLDSICKTVGAPYNVLIGDDIFKLFSHVYLLV DTPTRARLVKMFDSWRVFRVKGGALPLFPSAEMERIEAFLQQAGFRRAPAGPTAASLVAD IDALLPAMERRSRAGGDQALAERCAALADLRALLQSQALGPADLAGVSQKLASMKQQEQN QQNLETQAHQQSMSQNQGSSFQPQTPITQPQTPLPQTPSTLPPTPQTLPAQSLAPSLTQT PVPTESKARVLFGELLASGLVAVDQSLKPGSRPVYSLVFPRHKYSGAPATNALEQLLLDA SGQSQYVQIKVKELSKVQKAAAPLQRFVASGDLDMSTLQVLYETKSSKCAQCGKRFTGDD DGAARKRVHLDWHFRINKRSTNHKANIQSRTWYISQDEWVHFDESSLSEQAAAPVARAET AAAAPTRAQYVVVPPSETNMNNTCIVCREQVKATYNDALGEWVWDACVYAPGTKTGRKIA HAACLEETSRKRGPDGLPEAKRVRV NT seq 1698 nt NT seq  +upstreamnt  +downstreamnt atggttatctgtccacgtgatatatatcacgtgtgtgccactacaccatcgcccttctca cacttccttccaaccatggtcttttctccacttgtcgaggactacgcaacgtcgctcaaa gagctcacgttcaactcgcgtcccataattgtcaatctcaccaccatcgccaaggaaaat accgatgaggccgacggaattctcgcagccattacccatcgcatctaccattgcattccc gaacacaagcttttcgctctttacttgcttgatctgatctgcaaaaccgtcggcgccccc tacaatgtgcttattggcgacgacatcttcaagcttttctcgcatgtgtatttgttggtg gacacgccgaccagggcccgtctagttaagatgtttgatctgtggcgggtattccgagtc aagggcggcgcgttgccccttttccccctggcggaaatggagcgcatcgaagcgtttttg cagcaggctggctttcggcgcgcccccgcagggcctacggctgcgctgttggtggcggac atcgacgcgcttttgcccgccatggagcgccgtctgcgcgcggggggcgaccaggcgctt gcggaacggtgtgcggcgcttgccgacttgcgcgccctcttacagagccaggctcttggg ccagcagacttggctggggtgctgcagaaattggcgctgatgaagcagcaggagcagaac caacagaacctcgagactcaggcccaccagcagctgatgctgcaaaaccagggcctgctg ttccagccacaaacgccaatcacgcagccacagacacccttgccgcaaacgccgtcaaca ttgccgccaacgccacagacgcttccagcacaatctcttgcaccttcgcttacacaaacg ccggttccgaccgagctgaaggcccgtgtgcttttcggcgaattacttgcttcgggctta gtggctgtggaccagtcactcaagccaggctctcggccagtgtactcgcttgtttttccc cgccacaagtacctgggcgcaccggccaccaatgctcttgagcagctcttgctagatgcc agtggccagtctcagtatgtccagatcaaggtcaaagagctttctaaagtgcaaaaggct gcggctccgctccagcggtttgttgcttcgggcgaccttgacatgctgaccctccaggtc ttatacgagacaaaactgtccaagtgcgcccagtgcggcaagcgctttactggcgatgac gatggtgccgctcgcaaacgcgtgcatttggactggcacttccgtattaacaagcgcctg accaaccacaaggccaacattcaatcgcgcacgtggtatatttcacaagacgagtgggtg cattttgacgagtcctcactttcggaacaggcggctgcgcctgtggctcgtgctgagact gctgctgctgctccaacccgtgctcagtacgttgttgtgcctccgagcgagacaaacatg aacaacacgtgtattgtgtgtcgtgagcaggtcaaggcaacatacaatgatgcactaggc gagtgggtatgggacgcgtgtgtatacgctccgggaacgaagacgggtcggaagattgcc cacgcagcatgtttggaggagacgagcaggaagcgtggccctgacggtctaccagaagct aagagggtgcgggtgtga

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