Clavispora lusitaniae ATCC 42720: CLUG_05506
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Entry
CLUG_05506 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03082
ATP-dependent chromatin remodeling
clu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CLUG_05506
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CLUG_05506
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clu01009
]
CLUG_05506
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_05506
03036 Chromosome and associated proteins [BR:
clu03036
]
CLUG_05506
Protein phosphatases and associated proteins [BR:
clu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CLUG_05506
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CLUG_05506
SWI/SNF complex
CLUG_05506
Chromosome and associated proteins [BR:
clu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CLUG_05506
PBAF complex
CLUG_05506
SWI/SNF complex
CLUG_05506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
8495084
NCBI-ProteinID:
XP_002614728
UniProt:
C4YBC8
LinkDB
All DBs
AA seq
907 aa
AA seq
DB search
MFLRIFHHCHSILEMYPTTTRRGLHQYYIQNAKFTYQQNTYLKGIPPGAMNFNRSGQSQS
PPAAQQQQYDQRQKMSMLPPQFQNLTPQQLQELKKQPQFQNMLRQYFQRQQLMQQQAMQG
MNLAREGTQGGTGTMNANMATNINTQNASANAMNPGMAAAGMPMGAAGMNSAMNPAINPG
MGASLGSAMNPAMGSGVNPNVNMAQAVQPPMSQNLGQANQMSHPQTAPNMGSSINQNISM
NMASTANRNLGSRVPMQQNNMGQPMYSRAAQNAYLQQQQKLSRPMQQPAGYAPYVARQDM
DKASAMGMPGVSGASLVGAGVAGPGAAGAGAVSGALAGVGGPLAGAVNATAAGAAVPAQS
SALTGPINGINGAMGGQIHGPANGAASATNGAASGTSGGNRLIKEKPQIAPGFTPEAVAR
VPMKTLRSASEWSDRLREAGKDVPLDVRVYEDIIRKDESFLRLSAYEAQKHKAMLEKMAL
DIKTYGMIKQSRMNAISASAKNQYNNSIWGEGYQGYGNGASNTATQVILPRQNKTFTKVP
DLPSTDREMNARLLQNASKPAQVVPVRLDFDQERDRFKLRDTFLWNLNDDTYPLEHFVRT
LLEDYKFISEQHMHTVLASVSEQIKDFRKIPEKTMGEIRVPIKIDLIINNTQYVDQFEWD
ILNSRDGDPEEFATILCDEMSLPGEFATAIAFSIREQSQLYHKALFLVGYSFDGSAIREE
EIRSHILPALRVLNSDDASGPVEDFISTLRNPGIVADYSPSLNKLTQSEVEKVDKEMERE
SRRRRRHFNTENTFSYNENGPNSFSSGSGRGTTSRRNALHSGRGVKTTLPDLGDIPKTFR
TPMPSSVLPGGIDLGVPDIYGYNELIVNRTQVKNPDYKQPAPPGMVTSYRDSTGSFYVKI
LLRRGRN
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaagaattttccatcactgtcatagtatcctagaaatgtaccccactacaaca
cgtcggggcctacaccagtactacatacagaacgcgaaattcacctaccaacaaaacact
tatctcaagggtattccgccaggcgccatgaatttcaatcgaagtggacaatcacagagc
ccgccggcagcgcagcagcagcagtacgaccagcggcagaaaatgtcgatgctcccgccg
cagttccagaacctcacaccgcagcagctccaggaattgaaaaaacagccccagttccag
aacatgctccgccagtacttccagcggcagcagctcatgcagcagcaggccatgcaaggc
atgaaccttgcccgcgaggggacccagggcggcaccggcaccatgaacgcaaatatggcc
acaaacatcaacacgcagaacgccagtgctaatgccatgaacccaggcatggcggcagca
ggaatgcccatgggcgcggcggggatgaattcagcgatgaatccggcaatcaacccggga
atgggcgcctcgttggggctggctatgaacccagccatgggctctggtgtaaacccaaac
gtcaacatggcgcaggccgtgcagccgcccatgagccagaacttgggccaggccaaccaa
atgagccacccgcagaccgcgccgaacatgggctcctccatcaaccagaacattctgatg
aacatggctctgaccgccaatcgaaacttggggctgcgggtgcccatgcagcagaacaac
atgggccagcccatgtacagccgtgcagcgcagaacgcgtacttgcagcagcagcagaag
cttctgcggcccatgcagcagccggccggttacgctccatatgtggcacgtcaagacatg
gacaaggccctggccatgggaatgcctggcgtctcgggtgccagccttgtaggcgcagga
gtggcaggaccaggggcagctggtgcaggtgccgtcagtggagctttggctggcgtaggc
ggacctttggccggagccgtcaatgcaacagcagcaggcgcggctgtgccagctcaatca
agcgcattgactggcccaatcaacggaatcaacggagccatgggcggacaaatccatggg
cctgccaacggtgccgcgagcgcgacaaatggcgccgcttctggtacatcgggtggaaac
aggctcatcaaggagaagccgcagattgctcccgggttcacgcccgaggccgttgcacgt
gtgcccatgaaaacactccggtctgcctcagaatggtctgaccgcttgcgtgaagcaggc
aaagacgtacccttggatgtgcgtgtttacgaagacatcatcaggaaggacgagctgttt
ctccgtctctcagcgtacgaggcccagaaacacaaggccatgttggagaaaatggcactt
gacatcaaaacgtacgggatgatcaaacagctgcgtatgaacgccataagtgccctggcg
aaaaaccagtacaataacagcatctggggagaagggtatcagggctacggtaacggcgcc
agcaacacagccacgcaggtgattttacctcgccaaaacaaaacattcaccaaggtccct
gatcttccgtctacagaccgcgagatgaacgctcggcttttgcagaacgcttccaagccc
gcccaagttgtgcctgttcgcttggattttgaccaggaaagagaccggttcaagcttcgt
gacacctttttgtggaatcttaacgacgacacgtatccacttgagcactttgtacgaaca
cttctagaggactacaaattcatctcggaacagcacatgcacacggtgctagcgtctgtc
tccgaacagatcaaggacttccgtaagatcccagagaaaactatgggagaaatccgtgtg
cctatcaagatcgaccttattatcaacaacactcagtatgtggaccagtttgaatgggac
attttgaactcaagggacggcgatccggaagaatttgcgacgatcttatgcgacgaaatg
agtttgccaggtgaattcgccacggcgattgccttcagtatccgcgaacagtcccaactc
taccacaaggcgttgtttttagttgggtacagttttgatggttctgctattcgagaggag
gaaattcgctcgcatatcctcccagcattgcgagtgctcaactctgatgacgcaagcggt
cctgtcgaggacttcattagcactttgcggaacccgggaatcgtggccgattactcgcca
tctctcaacaaactcacccagctggaagtggagaaagtcgacaaggaaatggagcgcgag
tcgcggcgtagaagacgccatttcaatacagaaaacaccttcagctataacgaaaacgga
cccaacctgttctcgtctggcagtggacgtggcactacttctagaagaaatgctcttcac
tcaggaaggggtgttaaaacgacattgcctgaccttggagatattcccaaaacattccgt
accccaatgccatccagtgttctccctggcggaattgatttgggtgtgcccgacatttat
ggctataacgagctaatagtcaaccgaacacaggtgaaaaacccagattacaagcagcct
gcgcctccaggtatggtgacatcataccgtgacagtacaggctctttctacgtgaagatt
cttctccgccgaggcaggaactaa
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