KEGG   Clavispora lusitaniae ATCC 42720: CLUG_05682
Entry
CLUG_05682        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03082  ATP-dependent chromatin remodeling
clu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CLUG_05682
   03083 Polycomb repressive complex
    CLUG_05682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clu03036]
    CLUG_05682
Chromosome and associated proteins [BR:clu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     CLUG_05682
  Histone modification proteins
   HAT complexes
    HATB complex
     CLUG_05682
   HDAC complexes
    Sin3A-HDAC complex
     CLUG_05682
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     CLUG_05682
    PRC2.2
     CLUG_05682
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     CLUG_05682
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CLUG_05682
  Chromatin remodeling factors
   NuRD complex
    CLUG_05682
   NuRF complex
    CLUG_05682
   NuRF complex (fruit fly)
    CLUG_05682
SSDB
Motif
Pfam: WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_SPT8 NBCH_WD40 WD_LRWD1 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 8494865
NCBI-ProteinID: XP_002614196
UniProt: C4YBV4
LinkDB
AA seq 423 aa
MGPTRSRAPKRTRFFSNFVRIRYTYPGTMAEDQSVNIKDEYELWRKNCRYMYEFVSETAL
TWPSLTVEWLPDHKIGDVIDAQLLLGTHTSGEDTNYLKLASTQLPRSGVQRNEGTPAPKV
SSKIKIMKKFENTSEINRARYMPQDANIVATINGSGELDFADLNAGKSIAHVSPHTENGY
GLSWNASRKGYLLSSSDDKSVVLTDFNTLDKNDGRVFRSEVHTDIVNDVKWHAFDENVFG
SVSDDEKMLLFDTRSPEKAVSCYSSVGSKGINSLAFSPFSKNLLAIGDTNSNINLLDLRK
LSSISKGGEALHTMMGHGDAITCLEFSPHKDGIIASGSQDRRVIIWDLSKIGEEQVQEDA
EDGCPEIFMMHAGHTGAVTDLSWCPFVDWTLASVADDNIVHLWEISKSLVEDAPAVVNDA
DLE
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgggcccaacacggtcacgtgccccaaagcgcactaggtttttttctaactttgtacgt
atacgttatacatatccaggcacaatggcagaggatcagctggtcaatatcaaagacgag
tatgagttgtggagaaagaactgtcgatacatgtacgagtttgtgagcgagactgcctta
acgtggccttcgctcacggtggaatggcttccggaccataagattggtgatgttatagac
gcccagttgttgctagggacacacacatcgggcgaagacaccaactacctcaagcttgca
tcaacacaattgccaagatctggagtccaaaggaacgagggcacacctgctcccaaggtt
tcgtcgaaaatcaagattatgaagaagtttgagaacacgagcgagattaacagggcccgt
tatatgccccaggatgctaacatagttgccacgatcaacggcagcggtgaattggatttt
gccgatttgaatgcgggcaagtccatagcccatgtttccccacacacagaaaacggctac
ggtttgtcgtggaacgcgtctcgaaagggctacttgctttcgtcgtcggacgataaatct
gtcgttttgacggattttaacacgcttgataaaaacgacgggcgtgttttcagactggag
gtacatacagatattgtgaatgacgtgaaatggcacgctttcgacgaaaacgtttttggc
tccgtgtccgatgacgagaaaatgcttctcttcgacacgaggtcgcctgaaaaggcagtc
tcctgttacagtagcgtcggatcgaagggaatcaactcgcttgcgttttctccattttca
aagaacttgttggccataggcgacaccaactcaaacatcaacttgttggatctccgcaag
ctctcgtccatttccaaaggaggcgaagcacttcatactatgatgggccatggggacgcc
attacgtgcctcgagttttctccccacaaagacggaatcatagcgtcgggttcgcaagat
agaagagtgattatttgggacctttcgaaaatcggagaagaacaggtccaggaagatgca
gaggacggctgtccagaaattttcatgatgcatgctggccacacgggtgcggttacagat
ctcagttggtgtccatttgtggactggactcttgcctctgtggcggacgacaatattgtt
catctttgggagataagcaagtctttggtcgaggatgctcctgcggttgtcaatgacgcc
gacttggagtag

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