Clavispora lusitaniae ATCC 42720: CLUG_05709
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Entry
CLUG_05709 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLUG_05709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_05709
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_05709
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CLUG_05709
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CLUG_05709
U7-dependent histone pre-mRNA processing factors
CLUG_05709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
8494812
NCBI-ProteinID:
XP_002614223
UniProt:
C4YBY1
LinkDB
All DBs
AA seq
706 aa
AA seq
DB search
MDDSTILAQLDQARELAFSNRDVFPQVVKQILNLVSNPSAAVQRWCSVFLKQAFSAADSH
VSPGVKVDLAIDALPALKVLANVRDLDVFKNAIDVSILVFKLTFRYVAENDGSSHVWSGV
NDLKNELVAKFDTQFPFESTFDKEHDSLRNIDAKLELLKFVVTVVDYQSRSVSSKHYSLA
RINPNHTLIKPALMESEAAALVDVMLRTLQNDILVTPLVTATLNHLAVLVRRKRQYMDKI
VPVLESLDTTQKLQSNYESLETFKLSRKYVDRTLRVLLGYMVKCQVVPPKYQAAVSRKLS
VLTARGDEIRKKNILLPSPEDSAVRKRKLDGFENSSKKLRTVDYKHLYCLTDPANELNNF
DLSTVSQNILVTMALTALNKVDSRKLSKALEIISDRYLDAVKDLVPTAAPQTIKQEDDNE
DDDEAAESYNPETTFTLPPPKLLSFQEKKDHVALIIRNFFALANTGKPADDELQAAPNGI
SKELTKVAIQSWRQDSWVLLLTRLATRGLHTVDSESADGKENSELSDMVRRALFDHFLEK
IHERVDLVIEWLNEEWYSEKVVNEQKARDEIREKWFKKYEETPNEVDDVELQISKEVEAL
DIPTPRYNEWGQKVLDAMIPFLEPTDRKIFLRLLSDLPTLTPEMVHGIKSLCQDPARTKL
GFLSLQFLMMYRPPAKPACLDVLRELAEGDQEDLKEEAQKLLTKYA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcaccatcttggcacagctcgaccaggcccgcgagttggcgttttccaac
cgtgatgtgttcccgcaagtggtcaagcagattctcaacctcgtgtccaacccgtccgcc
gccgtccagcggtggtgcagtgttttcttgaaacaggcgttttcggcggcagacagccac
gtgctgcctggggtcaaggtggacttggccatcgacgcgttgccggcgctcaaggtgttg
gccaacgtgcgggacttggacgtgttcaaaaacgccatcgacgtgagcattcttgtgttc
aagctcacgtttcggtacgtggcggaaaacgacggcagctcgcacgtgtggagcggcgtc
aacgacttgaagaacgagttggtggccaagttcgacacgcagttccccttcgagctgacc
ttcgacaaggaacacgactccttgcgcaacatcgacgccaagttggagttgctcaagttc
gtggtcaccgtggtggactaccagctgcgctcggtctcgagcaagcactactcgttggcc
cgcatcaacccgaaccacaccttgatcaagcccgcgctcatggaaagcgaagccgccgcc
ttggtggatgtcatgttgcggacgctccagaacgacatcttggtcacgccgctcgtcacc
gccaccctcaaccacctcgccgtgcttgtgcgccgcaaaagacagtacatggacaagatc
gtgcccgttttggagctgctcgacaccacacagaaactccagtccaactacgagtcgctc
gaaacgttcaagctctcgcgcaagtacgtcgaccgtacgctccgtgtcttgcttggctac
atggtcaagtgccaggttgttccgcccaaataccaggccgctgtgagccgaaagctttct
gttctcacggcgcgaggcgacgagatccgcaaaaagaacatcttgttgccctcgcccgaa
gacctggctgtgcgcaagcgcaagcttgacggcttcgaaaacagctccaaaaaactccgc
acagtggactacaagcacttgtactgcttgaccgatccggccaacgaactcaacaacttt
gacttgtcgactgtgtcgcagaacatcttggtgacgatggcgctcacagcattgaacaag
gtggatctgcgcaagttgtccaaagcgctcgaaatcatcagcgaccgctatctcgacgca
gtaaaagatctagttcccacagcagctccgcaaacgataaaacaagaggacgacaacgaa
gacgatgacgaagcagctgagctgtacaacccagaaactaccttcaccctcccgcctccg
aagttgctttctttccaagagaaaaaggaccatgtggcgctcataatccgcaatttcttt
gcgcttgccaacacggggaaaccggcagacgacgagcttcaggctgcccccaacggcatc
agcaaagagctcacgaaagtggcaatccagtcatggcgccaagactcgtgggtgcttctt
cttacaaggttggccacccgcgggctccatacagtggactccgaatcagcggatggaaag
gagaatagcgagctcagcgatatggtgagacgggcgctctttgaccactttttggagaaa
atccacgaacgcgtagatctcgtgattgaatggctcaatgaagagtggtacagcgaaaag
gtggtgaacgagcaaaaggcccgtgatgagatccgcgagaaatggtttaagaagtacgag
gaaactccaaacgaagtcgacgatgtcgagctccagatttccaaagaggtcgaagctttg
gacattcctacgccgcgctacaacgaatggggccaaaaggtgttggacgcaatgattccg
tttttggagccaactgaccgcaaaatcttcctccgtttgttgagtgatttaccaacattg
actccagaaatggttcacggcatcaaatctttgtgccaggaccctgcacggaccaagttg
ggctttttgtcattacaatttttgatgatgtatcggcctccagccaaaccagcatgtttg
gatgttttgcgtgagttggccgaaggtgaccaggaagatttgaaggaggaggcccaaaag
ctattaaccaaatatgcgtag
DBGET
integrated database retrieval system