KEGG   Clavispora lusitaniae ATCC 42720: CLUG_05709
Entry
CLUG_05709        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K06100  symplekin
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CLUG_05709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clu03021]
    CLUG_05709
   03019 Messenger RNA biogenesis [BR:clu03019]
    CLUG_05709
Transcription machinery [BR:clu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     CLUG_05709
Messenger RNA biogenesis [BR:clu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     CLUG_05709
    U7-dependent histone pre-mRNA processing factors
     CLUG_05709
SSDB
Motif
Pfam: SYMPK_PTA1_N
Other DBs
NCBI-GeneID: 8494812
NCBI-ProteinID: XP_002614223
UniProt: C4YBY1
LinkDB
AA seq 706 aa
MDDSTILAQLDQARELAFSNRDVFPQVVKQILNLVSNPSAAVQRWCSVFLKQAFSAADSH
VSPGVKVDLAIDALPALKVLANVRDLDVFKNAIDVSILVFKLTFRYVAENDGSSHVWSGV
NDLKNELVAKFDTQFPFESTFDKEHDSLRNIDAKLELLKFVVTVVDYQSRSVSSKHYSLA
RINPNHTLIKPALMESEAAALVDVMLRTLQNDILVTPLVTATLNHLAVLVRRKRQYMDKI
VPVLESLDTTQKLQSNYESLETFKLSRKYVDRTLRVLLGYMVKCQVVPPKYQAAVSRKLS
VLTARGDEIRKKNILLPSPEDSAVRKRKLDGFENSSKKLRTVDYKHLYCLTDPANELNNF
DLSTVSQNILVTMALTALNKVDSRKLSKALEIISDRYLDAVKDLVPTAAPQTIKQEDDNE
DDDEAAESYNPETTFTLPPPKLLSFQEKKDHVALIIRNFFALANTGKPADDELQAAPNGI
SKELTKVAIQSWRQDSWVLLLTRLATRGLHTVDSESADGKENSELSDMVRRALFDHFLEK
IHERVDLVIEWLNEEWYSEKVVNEQKARDEIREKWFKKYEETPNEVDDVELQISKEVEAL
DIPTPRYNEWGQKVLDAMIPFLEPTDRKIFLRLLSDLPTLTPEMVHGIKSLCQDPARTKL
GFLSLQFLMMYRPPAKPACLDVLRELAEGDQEDLKEEAQKLLTKYA
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggacgacagcaccatcttggcacagctcgaccaggcccgcgagttggcgttttccaac
cgtgatgtgttcccgcaagtggtcaagcagattctcaacctcgtgtccaacccgtccgcc
gccgtccagcggtggtgcagtgttttcttgaaacaggcgttttcggcggcagacagccac
gtgctgcctggggtcaaggtggacttggccatcgacgcgttgccggcgctcaaggtgttg
gccaacgtgcgggacttggacgtgttcaaaaacgccatcgacgtgagcattcttgtgttc
aagctcacgtttcggtacgtggcggaaaacgacggcagctcgcacgtgtggagcggcgtc
aacgacttgaagaacgagttggtggccaagttcgacacgcagttccccttcgagctgacc
ttcgacaaggaacacgactccttgcgcaacatcgacgccaagttggagttgctcaagttc
gtggtcaccgtggtggactaccagctgcgctcggtctcgagcaagcactactcgttggcc
cgcatcaacccgaaccacaccttgatcaagcccgcgctcatggaaagcgaagccgccgcc
ttggtggatgtcatgttgcggacgctccagaacgacatcttggtcacgccgctcgtcacc
gccaccctcaaccacctcgccgtgcttgtgcgccgcaaaagacagtacatggacaagatc
gtgcccgttttggagctgctcgacaccacacagaaactccagtccaactacgagtcgctc
gaaacgttcaagctctcgcgcaagtacgtcgaccgtacgctccgtgtcttgcttggctac
atggtcaagtgccaggttgttccgcccaaataccaggccgctgtgagccgaaagctttct
gttctcacggcgcgaggcgacgagatccgcaaaaagaacatcttgttgccctcgcccgaa
gacctggctgtgcgcaagcgcaagcttgacggcttcgaaaacagctccaaaaaactccgc
acagtggactacaagcacttgtactgcttgaccgatccggccaacgaactcaacaacttt
gacttgtcgactgtgtcgcagaacatcttggtgacgatggcgctcacagcattgaacaag
gtggatctgcgcaagttgtccaaagcgctcgaaatcatcagcgaccgctatctcgacgca
gtaaaagatctagttcccacagcagctccgcaaacgataaaacaagaggacgacaacgaa
gacgatgacgaagcagctgagctgtacaacccagaaactaccttcaccctcccgcctccg
aagttgctttctttccaagagaaaaaggaccatgtggcgctcataatccgcaatttcttt
gcgcttgccaacacggggaaaccggcagacgacgagcttcaggctgcccccaacggcatc
agcaaagagctcacgaaagtggcaatccagtcatggcgccaagactcgtgggtgcttctt
cttacaaggttggccacccgcgggctccatacagtggactccgaatcagcggatggaaag
gagaatagcgagctcagcgatatggtgagacgggcgctctttgaccactttttggagaaa
atccacgaacgcgtagatctcgtgattgaatggctcaatgaagagtggtacagcgaaaag
gtggtgaacgagcaaaaggcccgtgatgagatccgcgagaaatggtttaagaagtacgag
gaaactccaaacgaagtcgacgatgtcgagctccagatttccaaagaggtcgaagctttg
gacattcctacgccgcgctacaacgaatggggccaaaaggtgttggacgcaatgattccg
tttttggagccaactgaccgcaaaatcttcctccgtttgttgagtgatttaccaacattg
actccagaaatggttcacggcatcaaatctttgtgccaggaccctgcacggaccaagttg
ggctttttgtcattacaatttttgatgatgtatcggcctccagccaaaccagcatgtttg
gatgttttgcgtgagttggccgaaggtgaccaggaagatttgaaggaggaggcccaaaag
ctattaaccaaatatgcgtag

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