KEGG   Clavispora lusitaniae ATCC 42720: CLUG_05714
Entry
CLUG_05714        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03030  DNA replication
clu03410  Base excision repair
clu03420  Nucleotide excision repair
clu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLUG_05714
   03410 Base excision repair
    CLUG_05714
   03420 Nucleotide excision repair
    CLUG_05714
   03430 Mismatch repair
    CLUG_05714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clu03032]
    CLUG_05714
   03036 Chromosome and associated proteins [BR:clu03036]
    CLUG_05714
   03400 DNA repair and recombination proteins [BR:clu03400]
    CLUG_05714
DNA replication proteins [BR:clu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CLUG_05714
  DNA Replication Termination Factors
   ELG1-RFC complex
    CLUG_05714
Chromosome and associated proteins [BR:clu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CLUG_05714
DNA repair and recombination proteins [BR:clu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CLUG_05714
  Check point factors
   HRAD17(Rad24)-RFC complex
    CLUG_05714
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_22 AAA_11 RuvB_N AAA_16 Mg_chelatase SLFN-g3_helicase AAA_14 AAA_5 DUF815 AAA_24 nSTAND3 AAA_assoc_2 ResIII AAA_28 AAA_7 AAA_19 AAA_30 AAA_2 bpMoxR DNA_pol3_gamma3 AAA_3 RNA_helicase ABC_tran AAA_6
Other DBs
NCBI-GeneID: 8494734
NCBI-ProteinID: XP_002614229
UniProt: C4YBY6
LinkDB
AA seq 339 aa
MSSYDQERLDHTPWVEKYRPKKLDDVASQDHAVRVLQKTLQSANLPHMLFYGPPGTGKTS
TVLALAKQLYGPRLYRSRVLELNASDERGISIVRQKIKNFARLTVSNPSPEDLREYPCPP
YKIIILDEADSMTNDAQSALRRTMENYSGVTRFCLICNYITRIIDPLASRCSKFRFRSLD
GENALSRLRYVVEQEHIPLASDSVLNDILAVSGGDLRKAITYLQSATRSGDAGGVSSAKI
KEISGVVDDASMETLVGAIRAKNPKQIAQVVKDTVLEGWSAQQTAAQLHDVFLLDDALSS
QEKNDIARLLFETDKRLNSGTDEHIQLLNLSLQIAGALA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgctgtcgtacgaccaggaaagactcgaccacacgccgtgggtcgaaaagtaccgcccc
aagaaactcgacgacgtggcgtcgcaggaccacgccgttcgcgtgctccagaaaaccctc
cagctggccaacttgccacacatgctcttctacggcccgcctggaaccggcaaaacatcc
acggtgttggcgcttgccaaacagctctacggcccgcggttgtaccgtctgcgggtgctt
gagctcaacgcgtcggacgaacgaggcattctgatagtgcgccagaagatcaaaaacttt
gcccggctcacggtgtcgaacccgtcgcccgaggacttgcgcgagtacccgtgtccgccg
tacaagatcatcatcttggacgaggccgactccatgaccaacgatgcgcaatcggcgttg
cggcgcaccatggaaaactactcgggcgtgacgcgtttctgcttgatttgcaactacatc
acgcgcatcatcgacccgttggcgctgcggtgctccaagttccgcttccgcctgttggac
ggcgaaaacgccttgctgcgcttgcgctatgtcgtggagcaggaacacatcccgcttgcg
ctggatctggtgctcaatgacattttggccgtctcgggcggcgacttgcggaaagccatc
acgtatttgcagtcggccacgcgcctgggcgacgctggcggcgtttcgctggccaaaatc
aaggagatttcgggcgtcgtggatgatgcgctgatggagactttggtcggggccattcgg
gcgaaaaacccaaagcagattgctcaggtggtcaaggacaccgtcctcgagggctggagc
gcccagcagacggcggcacagctccacgatgtgtttcttcttgacgacgccttgtcctcg
caggaaaagaacgacattgcccgtcttttgtttgaaacagacaagcgcttgaacagtgga
accgacgagcatatccaattgttgaacttgtctcttcagatcgcaggtgcattggcatga

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