Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K03143 | transcription initiation factor TFIIH subunit 3 |
|
Organism |
clu Clavispora lusitaniae ATCC 42720
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:clu00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLUG_05739
09124 Replication and repair
03420 Nucleotide excision repair
CLUG_05739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:clu03021]
CLUG_05739
03400 DNA repair and recombination proteins [BR:clu03400]
CLUG_05739
Transcription machinery [BR:clu03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLUG_05739
DNA repair and recombination proteins [BR:clu03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLUG_05739
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
AA seq |
332 aa
MDNIADRVFTETTSDPPADNPSLLTVILELTPKSIAALDASLQDIVKALVVFLNAHLSLN
NSNQVAFLVSSHVGARFLHPGVSDVETETRFVNPGMYRQFRLVDEAVFGALNKELERLAS
AAKNDARSTLAGALSMAMTYTNRMLHVDQSGSAVQVAAAGTAGAQTTAAMGARVLVVSAN
ESDDNNYMGIMNAIFAAQKMKVAIDVAKLGRRSAPYLEQAADATQGVYLHVADPRGMVQT
LATAFFVEPSLRSVVILPTHGNVDYKASCFLTGRAVDVGYVCSVCLCIMSMLPDSGACPM
CHSQFDEHHIARLRRGPSVRKRRKMEETKAEA |
NT seq |
999 nt +upstreamnt +downstreamnt
atggacaatattgccgaccgtgttttcactgaaactacatcagatccgcccgccgacaac
ccatcgcttctaacggtgattcttgaacttacacccaaatccatcgctgctctagacgcc
agcctccaggatatcgtcaaggcgcttgttgtgtttctcaatgcacacctttcgctcaat
aatagcaaccaagtggcgtttcttgtgtcgctgcatgtgggagcccgcttcttgcaccct
ggcgtttcggatgtcgagacagagactcgctttgtcaacccaggaatgtaccgccagttc
cggcttgtggacgaggcggtgtttggagcgctcaataaggaactcgaacggcttgcgctg
gctgcaaaaaacgacgcccgttcgacattggccggcgccttgctgatggccatgacatac
acaaacagaatgctccatgtggaccagagcggcagcgcggtacaggtagcggcagcgggc
actgctggtgctcagacaactgccgccatgggcgcccgtgtgcttgtggtatcagccaat
gagtcggacgacaacaattacatggggatcatgaatgcgatttttgcagcacaaaagatg
aaagtggccattgacgtggctaaacttggccgtcggtcagcaccgtaccttgagcaggct
gcagacgcgacgcagggggtgtatttgcatgtggcagacccacggggaatggtgcaaact
ttagccacggcgtttttcgtcgagccgctgcttcggctggttgtaattttgcccacgcac
ggaaacgtcgactacaaggccagctgcttcctcacgggtcgtgctgttgatgttggctac
gtgtgtctggtgtgtctatgtattatgagtatgctcccagacctgggcgcatgtccaatg
tgtcattcgcaattcgatgagcatcatattgctcgtcttcggcgagggccgctggttagg
aagcggaggaaaatggaagagacaaaggcagaagcgtga |