KEGG   Clavispora lusitaniae ATCC 42720: CLUG_05739
Entry
CLUG_05739        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03022  Basal transcription factors
clu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CLUG_05739
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUG_05739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clu03021]
    CLUG_05739
   03400 DNA repair and recombination proteins [BR:clu03400]
    CLUG_05739
Transcription machinery [BR:clu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CLUG_05739
DNA repair and recombination proteins [BR:clu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CLUG_05739
SSDB
Motif
Pfam: Tfb4 Rad50_zn_hook DUF4776 Zf_2nd_IFT121
Other DBs
NCBI-GeneID: 8494952
NCBI-ProteinID: XP_002614253
UniProt: C4YC11
LinkDB
AA seq 332 aa
MDNIADRVFTETTSDPPADNPSLLTVILELTPKSIAALDASLQDIVKALVVFLNAHLSLN
NSNQVAFLVSSHVGARFLHPGVSDVETETRFVNPGMYRQFRLVDEAVFGALNKELERLAS
AAKNDARSTLAGALSMAMTYTNRMLHVDQSGSAVQVAAAGTAGAQTTAAMGARVLVVSAN
ESDDNNYMGIMNAIFAAQKMKVAIDVAKLGRRSAPYLEQAADATQGVYLHVADPRGMVQT
LATAFFVEPSLRSVVILPTHGNVDYKASCFLTGRAVDVGYVCSVCLCIMSMLPDSGACPM
CHSQFDEHHIARLRRGPSVRKRRKMEETKAEA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggacaatattgccgaccgtgttttcactgaaactacatcagatccgcccgccgacaac
ccatcgcttctaacggtgattcttgaacttacacccaaatccatcgctgctctagacgcc
agcctccaggatatcgtcaaggcgcttgttgtgtttctcaatgcacacctttcgctcaat
aatagcaaccaagtggcgtttcttgtgtcgctgcatgtgggagcccgcttcttgcaccct
ggcgtttcggatgtcgagacagagactcgctttgtcaacccaggaatgtaccgccagttc
cggcttgtggacgaggcggtgtttggagcgctcaataaggaactcgaacggcttgcgctg
gctgcaaaaaacgacgcccgttcgacattggccggcgccttgctgatggccatgacatac
acaaacagaatgctccatgtggaccagagcggcagcgcggtacaggtagcggcagcgggc
actgctggtgctcagacaactgccgccatgggcgcccgtgtgcttgtggtatcagccaat
gagtcggacgacaacaattacatggggatcatgaatgcgatttttgcagcacaaaagatg
aaagtggccattgacgtggctaaacttggccgtcggtcagcaccgtaccttgagcaggct
gcagacgcgacgcagggggtgtatttgcatgtggcagacccacggggaatggtgcaaact
ttagccacggcgtttttcgtcgagccgctgcttcggctggttgtaattttgcccacgcac
ggaaacgtcgactacaaggccagctgcttcctcacgggtcgtgctgttgatgttggctac
gtgtgtctggtgtgtctatgtattatgagtatgctcccagacctgggcgcatgtccaatg
tgtcattcgcaattcgatgagcatcatattgctcgtcttcggcgagggccgctggttagg
aagcggaggaaaatggaagagacaaaggcagaagcgtga

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