Clavispora lusitaniae ATCC 42720: CLUG_05852
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Entry
CLUG_05852 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLUG_05852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_05852
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CLUG_05852
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CLUG_05852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
Motif
Other DBs
NCBI-GeneID:
8494742
NCBI-ProteinID:
XP_002614366
UniProt:
C4YC35
LinkDB
All DBs
AA seq
559 aa
AA seq
DB search
MECYKEVEKNSKMKSYSNQSIMLAAMDNGEQGLTPEVEEALEFLEGILESLGEQNEALDE
EYEKLSQKKIRKSNMSAIEERKQEIDTFKSKNEFHIDSIEQVMRFLREGKVDVGSIWAVQ
DDLTFYVESNQEPDFVDDETVYDEIIKEAKDNSAKNIVVSNGHDDTVDTSLLSSQEEHES
VEPKASDSSKRKRTASASPAPQQHSNPEITPKVNPVRVSTPKVKLVEKTTSNDNSSPAFV
TTLKPASTPSKPAGTLKWSVAAGGHSSEQSQNNVKPVSVSENTEKEKEKEKEPTKSTSVS
KEYPTKNETDASSELLSLLTKNDEYSPYLEVLKNSALPQCELELFCDVNLLRVPPGIQDF
AVSFTANNKAKDASRFLAKSETYDPFRTLIHKSYLPKGLFDAEAEPQFKPPLFVSKIENY
WNRIRAGNQFDQFLKEIETLASQKTPESASMVNELTMVLFYGYYYGYLPLENIIAESLLH
KLGWVPYGMRPEDNRASAKSESNKQFQYWFKKLDESSTGDNDDLKDFKVFDLSVWEIYVK
HGVKFDVKSSRSEPCKSLL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaatgctataaggaagtggaaaagaactcaaagatgaaatcgtattcgaaccagtct
atcatgctagctgcaatggacaatggggaacaaggactaacgccggaagttgaagaagcc
ctagaattcctagaagggatccttgagagcttgggagaacaaaacgaagccttggatgag
gaatatgaaaaactatcgcagaagaagatcagaaagagtaacatgctggcaatagaggag
aggaaacaggagattgacacgtttaaatcgaagaatgagtttcacattgacagtatagag
caagtgatgcgtttcctcagagaggggaaggtggatgttggtctgatatgggctgtacaa
gacgatttgaccttctatgtggaatcgaaccaggagccagattttgttgatgacgaaacg
gtttatgatgagataatcaaagaagctaaagacaatagtgccaaaaacattgtggtttca
aatggacatgatgacacagttgacactagtctattgagcagtcaagaggaacatgaatca
gtggaaccaaaagcctcagatagctcgaaacgcaagcgcacagcctcagcctctcctgct
ccacaacaacattctaaccctgaaataacgcctaaagtcaacccagtcagagtttcgaca
ccgaaagtcaagcttgttgagaaaactacctcgaacgataattctagtcctgcttttgtc
actactctcaaaccagcatcgacaccgtcaaaaccagctggtactttgaagtggtctgtt
gctgcaggtggacacagctctgaacagagccagaacaatgtgaaaccagtgtcggtttct
gagaacacagaaaaggagaaagaaaaagagaaggagccaacgaagagcacaagtgttagt
aaagagtatccaacaaagaatgagactgacgcttcatcggagttactctctctactcaca
aagaatgacgaatattcgccgtatttggaggtgttgaaaaactctgcattaccccaatgt
gagttggagctattttgcgatgtgaatttgttaagggttccacctgggatccaagacttt
gcagtctcgttcactgcaaacaacaaagccaaagatgcatcgagattcttagcaaagtca
gagacatatgatcctttccgcacgctaatccacaagtcataccttccgaaagggcttttc
gatgctgaagcagaacctcagttcaaacctccattatttgtttcaaagattgagaactac
tggaatcgcataagggcaggcaaccagtttgatcagtttttgaaggagattgaaaccttg
gcatcacagaaaactcctgaaagcgcgtcaatggtcaatgaactcacgatggttttattt
tatggctactactatgggtatttgccactagaaaacatcattgctgagtctcttcttcac
aagttgggctgggtaccatatggtatgcgacctgaagacaatcgagcatctgccaaatcg
gagtcaaacaagcaattccagtactggtttaaaaaattggatgagctgagcacgggtgac
aatgacgatttgaaggatttcaaggtttttgacttgtctgtgtgggaaatttatgtcaag
cacggtgtcaagtttgacgtaaaactgagccgaagcgagccttgcaaaagtctcttgtag
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