Canis lupus dingo (dingo): 112640349
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Entry
112640349 CDS
T08371
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112640349 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112640349 (PARN)
Enzymes [BR:
clud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112640349 (PARN)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112640349 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
RRM_1
NCBP3
Motif
Other DBs
NCBI-GeneID:
112640349
NCBI-ProteinID:
XP_025272239
Ensembl:
ENSCAFG00020024126
UniProt:
A0A8C0R6X3
LinkDB
All DBs
Position
6:28514487..28669681
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AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYEAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFCNGIPYLNHEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIENLLQSEESKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVDTLETEKKERYIV
ISKVDEEERKRREQQKLAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTATEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIHISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAQYVGKKREEKQIKRKWTEDTWQEVERKRLN
TQCISYALQNHYYHTNSLTATSTVGKRNLSPSPAEADLEARISGEISDTELEQTESCAES
LSEGKKKAKKLKRMKKDLSPAGAIPDSPAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaaccttcacaaagtgtacgaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
actgcactaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacaaagtcatttaacttctatgtattcccgaaacctttcaataggtcc
tcaccagatgtcaagtttgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgattttaataaagttttctgcaatggaattccatatttaaatcatgaagaagaaaga
cagttaagagagcagtatgatgaaaaacgtctgcagtccaatggtgcaggagctctgtct
tatgtatctccaaacacttcaaaatgtcctgtgacaattcctgaggaccagaagaagttt
attgaccaagtggtagagaaaatagaaaatttactacaaagtgaagaaagcaagaacttg
gatttagagccatgcactgggttccaaagaaaactaatctatcagactttgagctggaag
tatcccaaaggcattcatgttgacactttagaaactgaaaagaaggagcgctacatcgtc
atcagcaaagtagatgaagaagagcgtaagaggagggagcagcagaaactcgctaaggaa
caggaagaactgaatgatgctgtgggattttctcgagtcattcatgccattgccaattcg
ggaaaactcgttattggacacaatatgctcttggatgtcatgcacacagttcatcagttt
tactgcccactgcctgcggacttaaatgagtttaaggagatgacaacatgtgttttcccc
agactcttggatacaaaattgatggccagcacacaaccttttaaggacatcattaacaac
acatcccttgcagaattggaaaagcggttaaaagagacgcctttcaaccctcctaaagtt
gaaagtgcagaaggatttccaagttatgacacagctactgaacagctccacgaggcaggc
tatgatgcttatatcacagggctgtgcttcatctccatggcgaactacctaggttctttt
cttagtcctccgaaaattcatgtgtcggctagatcaaaactcatcgaacctttttttaac
aagttatttcttatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
caaccaaaacgtgatcatgttcttcatgtgacattccccaaagaatggaaaaccagtgac
ctttaccagcttttcagtgcctttggtaacattcatatatcctggattgatgatacatca
gcatttgtttctctcagccagccggaacaagtacagattgctgtcaataccagcaaatat
gcagaaagctatcggatccagacctatgcccaatatgtggggaaaaaacgtgaggagaag
cagatcaagagaaagtggacagaagatacttggcaggaggttgagagaaaacggttaaac
actcagtgcatatcctatgctctgcagaatcactactaccacaccaacagtcttacagcg
accagcacagtaggaaagagaaacttgagtcccagcccagccgaggcggacttggaggcc
agaatatcaggggagatttcggacaccgagctcgagcagactgagtcctgtgcagaatcc
ctctctgagggaaagaagaaggccaagaaattaaaaagaatgaagaaggacctttcacca
gcaggagccatcccggacagccctgccaagctcttcgaagttcccgacacgtggtaa
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