Canis lupus dingo (dingo): 112640361
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Entry
112640361 CDS
T08371
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112640361 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112640361 (GSPT1)
03012 Translation factors [BR:
clud03012
]
112640361 (GSPT1)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112640361 (GSPT1)
Translation factors [BR:
clud03012
]
Eukaryotic type
Release factors
112640361 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
112640361
NCBI-ProteinID:
XP_025272262
Ensembl:
ENSCAFG00020024250
LinkDB
All DBs
Position
6:30829319..30869470
Genome browser
AA seq
642 aa
AA seq
DB search
MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGGGPSAAAAAAAA
AEAQREPLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPPPPAAASHGAGSGAGGA
PAPVEPSQEEQSLLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEAELGGCSM
GDGRAAEESAQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYL
TGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTIL
DAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIV
LINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCP
WYTGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPN
KHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQI
VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL
RTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagcggcggcggcggcggcggcggcggcggcggcgggagcagcagcggc
agcagcagcagcgactcggcgcccgactgctgggaccaggcggacatggaggcgcccggg
ccgggaccgtgcggcggcggcggcggcggcccctcggcggcggcggcggcggcggcggcg
gccgaggcccagcgggagcccctcagcgcggccttcagccggcagctcaacgtcaacgcc
aagcccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgcggggcccg
gcccagccgccgccgcccgccgccgcgagccacggagccggcagcggcgcgggaggcgct
ccggcacctgtggaaccttctcaagaggaacagtcattgttatgtgaaggttcaaattca
gctgttagcatggaactttcagaacctgttgtagaaaatggggagacagaaatgtcccca
gaagaatcatgggagcacaaagaagaaataagtgaagcagagttagggggttgttccatg
ggagatggaagagctgctgaggagagtgcccaagaaatgatggaggaggaagaggaaata
ccaaaacccaaatctgtggtcgcgcccccgggggctccaaaaaaagaacatgtaaatgtg
gtattcattgggcatgtagatgctggcaagtcaaccattggaggacaaataatgtatttg
accggaatggttgacaaaaggacactcgagaaatacgaaagagaagctaaagagaaaaac
agagaaacttggtatttgtcttgggccttagacacaaatcaggaagaacgagacaagggt
aaaacagtagaagtgggccgtgcctattttgaaacagaaaagaagcatttcacaattctg
gatgcccctggccataagagttttgtcccaaatatgattggtggtgcttctcaagcagat
ttggctgtactggtcatctctgctagaaaaggagagtttgaaactggatttgaaaaaggt
ggacagacaagagaacatgcaatgttggcaaagacggcaggtgtcaaacacttaattgtg
ctcatcaataagatggatgatccaacggtaaattggagcaatgagagatacgaagaatgt
aaagagaaactagtgccatttttgaaaaaggttggcttcaatcccaaaaaggacattcac
tttatgccctgctcaggactcactggagcgaatctaaaagagcaatcagatttctgtcct
tggtacactggattaccgtttattccatatctggataatttgccaaacttcaatagatca
gttgatggaccaatcaggctgccaattgtggataagtacaaggatatgggcactgtggtc
ctgggaaagctggaatcaggatctatttgtaaaggccagcagcttgtgatgatgccaaac
aagcacaatgtggaagttctcggaatcctttctgatgatgtagaaactgattctgtagcc
ccaggtgaaaacctcaaaatcagactgaaaggaattgaagaggaggagattcttccggga
ttcatactttgtgatcctaataatctttgtcattctggacgcacatttgatgcccagata
gtgattatagagcacaaatccatcatctgcccaggttataatgcggtgctgcatattcac
acctgtattgaggaagtcgaaataacagccttaatctgcttggtagacaaaaaatcagga
gaaaaaagtaagactcgaccccgttttgtgaaacaagatcaagtatgcatcgcccgctta
aggacagcaggaaccatctgccttgagacctttaaagacttccctcagatggggcgcttt
accttaagagatgagggtaaaaccattgcaattgggaaagttctgaaactggttccagag
aaagactaa
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