Canis lupus dingo (dingo): 112640734
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Entry
112640734 CDS
T08371
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112640734 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clud03041
]
112640734 (PRPF38B)
Spliceosome [BR:
clud03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112640734 (PRPF38B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
112640734
NCBI-ProteinID:
XP_025273195
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Position
6:complement(42892079..42900104)
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AA seq
616 aa
AA seq
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MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGGATKPAVSGKQGNVLPLWGNEKTMNLN
PMILTNILSSPYFKVQLYELKTYHEVVDEIYFKFTALKLFLLTWIYSAPTCWCFSRSPRA
RACIDFDVGLVLLVFFIRSRQGSGLTQSCSEARSSPGSQVEVTHVEPWEKGSRKTAGQTG
MCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPP
TDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQ
QIKTRPRKIKKDGKEGPEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSF
DRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDRR
DRDREREKENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDR
RHRDDKKDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKR
SRSGSQGRTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSI
EPESQERQHKNKDETV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggcggcg
gccgcggcccagcagcagcagcagtgcggcggcggcggcggcgccaccaagccggcggtc
tcgggcaagcaggggaatgtgctgccgctgtggggcaacgagaagacgatgaacctcaac
cccatgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgagctc
aagacctaccacgaggtggtggacgagatctactttaagttcacagctttaaaattattc
cttttgacgtggatctactcagcgccaacttgttggtgcttctcccgctcaccccgggcc
agggcgtgtattgacttcgatgttggcctcgtgttgttggtattctttatccgatccaga
cagggaagtggattgactcagtcttgcagcgaggctcggagcagcccagggtcgcaggta
gaggtcacgcatgttgagccgtgggagaaaggaagcaggaaaacagcaggccaaacgggg
atgtgcggaggggttcgaggtgttggaacaggaggaattgtttctacagctttctgcctg
ttatacaaattatttactctgaagctaactcgtaagcaagtgatgggtctcataacgcac
acagactctccatatattagagcccttggatttatgtatataaggtacacacagccccct
acagatctatgggactggtttgaatccttccttgatgatgaagaggacctagatgtgaag
gctggtggaggctgtgtaatgaccattggagaaatgctgcggtcttttctcacaaaattg
gagtggttttctaccctgtttccaagaattccagttccagttcagaagaatattgatcaa
cagattaaaacccgccccagaaaaatcaagaaggatgggaaggaaggtcctgaggaaata
gacagacatgttgaacgcaggcgttccaggtctccgaggagatcactgagtccacggagg
tccccaagaagatcaagaagtagaagccatcatcgggagggccatgggtcttctagtttt
gatcgagaattagaaagagagaaagaacgccagcgactagagcgtgaagccaaagaaagg
gagaaagaaaggcgaagatcccgaagtattgatcgggggttggaacgcaggcggagtagc
aggagtagggaaaggcatagaagtcgtagtcgaagtcgggataggaaaggggaccgaaga
gacagggatcgggaaagagaaaaagaaaatgagagaggtagaagacgagatcgtgactat
gataaggaaagaggtaatgaccgagaaaaggagcgagagcgatcaagagaacggtccaag
gaacggagaagtaggggtgaggtagaagagaagaaacacaaagaagataaagatgatagg
cggcatagagatgacaaaaaagattccaagaaggagaaaaaacacagtaggagtagaagc
agagaaaggaaacacagaagtaggagtagaagtaggaatgcagggaaacgaagcagaagc
aggagcaaagagaaatcaagtaaacataaaaatgaaagtaaagaaaaatcaaataaacga
agtagaagtggcagtcaaggaagaactgacagtgttgaaaaatcaagaaaacgggagcat
agccccagcaaagaaaaatctagaaagcgtagcagaagcaaagaacgttcccacaaacga
gatcacagtgatagtaaggaccagtctgacaaacacgatcgtcgaaggagccaaagtata
gaaccagagagccaagaaaggcaacataaaaacaaagatgagactgtgtga
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