Canis lupus dingo (dingo): 112640765
Help
Entry
112640765 CDS
T08371
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X3
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04820
Cytoskeleton in muscle cells
clud04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112640765 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112640765 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112640765 (COL11A1)
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112640765 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
112640765
NCBI-ProteinID:
XP_025273251
LinkDB
All DBs
Position
6:47186941..47384287
Genome browser
AA seq
1818 aa
AA seq
DB search
MERRPSRWRTRRWPWGLTAAALALTCLLQAAGVGGAAPVDVLKALDFHNSPEGITKTTGF
CTNRKNSKDSDTAYRVSKQAQLSAPTKQLFSGGAFPEDFSILFTIKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQLLIIGDPKAAYDYCEHYS
PDCDSSVPKAAQAQEPQIDEKKKSNFKKKTRTVATNSKEKSKKFTPPKSEKFASKKKKSY
QAAAKAKLGVKANIVDDFQEYNYGTEESYQTVAPRHVSGPNEPNPVEEVFTEEYLTGEDY
DSQRKNSEDTLYENKGIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPTNEEFGPGVPAE
TDITETSINSHGGYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPTGPPGDP
GERGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALR
GPPGPMGLTGRPGPVGGQGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR
GMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGEDGMRGEDGEIGPRGLPGEA
GPRGLLGPRGTPGPTGQPGIAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPI
GPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGAD
GVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPS
GQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPR
GSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHP
GQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAK
GDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTA
GPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK
GEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGAR
GFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSV
GGVGEKGEPGEAGNPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNP
GPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAA
GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQD
GPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDG
GIPGPAGPIGPPGPPGLPGPQGPKGTKGSAGPAGQKGDSGLPGPPGPPGPPGEVIQPLPI
LSPKKTRRHAENMQADAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCK
DLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPNKKSEGVRISSWPKEKP
GSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYTCHQSAAWYDVSSGSY
DKALRFLGSNDEEMSYDNNPYIKALYDGCASRKGYDKTVIEINTPKIDQVPIVDVMINDF
GDQNQKFGFEVGPVCFLG
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggagcggaggccgtctcggtggaggacgcggcggtggccctgggggctcaccgcggcc
gccctcgcgctgacttgcctcctccaggctgcaggggtcggcggagcggctccagttgat
gtactaaaagctctagattttcacaactctccagagggaataacaaaaacaacgggcttt
tgcacaaacagaaagaattcaaaagattcggacactgcttacagagtttcaaagcaagca
caactcagtgctcccacaaaacagttattttcaggaggagcttttccagaagatttttca
atactatttacaataaaacccaaaaaaggaattcagtctttccttttatctatatataat
gagcacggtattcagcaaatcggtgttgaggttggaagatcacctgttttcctgtttgaa
gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct
gatggaaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtg
gattgtaagaagaaaaccacaaaaccacttgatagaagtgagagagcaatcgttgacacc
aatggaatcactgtgtttggaacaagaattttggatgaagaagtttttgagggtgacatc
cagcagctgctgatcataggtgaccccaaagcagcatatgactactgtgagcattatagt
ccagactgtgactcttcagtgcccaaggccgctcaggctcaggaaccgcagattgatgag
aaaaagaaatccaatttcaaaaagaagacgaggacagtggccactaactcaaaggaaaaa
tccaaaaagtttacaccccctaaatctgaaaaatttgcgtccaagaagaagaaaagttat
caagcagcagcaaaagccaaactaggggtaaaggcaaatatcgttgatgattttcaagag
tacaactatggaacagaggaaagttatcagacagtagctcctaggcatgtatctgggcca
aatgagccaaatccagttgaagaagtatttactgaagaatatctaactggagaggattat
gattcccagaggaaaaattctgaggatacactatatgaaaacaaaggaatagacggcagg
gactctgaccttctggtagatggagatttaggcgaatatgatttttacgaatataaagaa
tatgaagataaaccaacaagccccactaatgaagaatttggtccaggtgttccagcagaa
acagatatcacagaaacaagcataaatagccatggtggatatggagaaaagggacagaaa
ggagaaccagcagtagttgaacctggtatgcttattgaaggaccaccagggccagcagga
cctgcgggtcttatgggtcctcccggtctacaaggccccactggaccccctggtgatcct
ggtgagaggggtcccccaggacgtcctggtttaccaggcgctgatggtctacccggtcct
cccggtaccatgttaatgttgccgtttcgttatggaggcgatggttccaaaggaccaacc
atctctgctcaggaagctcaagctcaggcgattcttcagcaggcccggattgctttgaga
ggtccacctggcccaatgggtctaactggaagaccgggtcctgtgggggggcagggttca
tctggtgccaaaggtgagagtggtgacccaggtcctcagggccctcgtggtgttcaaggt
ccacctggtccaacgggaaaacctggaaaaaggggtcgtccaggtgctgatggaggaaga
ggaatgccaggagaacctggagcaaagggagatcggggatttgatggacttccaggtctg
ccaggtgacaaaggtcacaggggcgaacggggcccccaaggcccccctggtcctcctgga
gaagatggaatgaggggagaagatggagaaataggaccacggggtcttccaggtgaagct
ggtccacgaggtttgctgggaccaaggggaactccaggacctacagggcagcctggtatt
gcaggtgttgatggccccccaggaccaaaaggaaacatgggtccccaaggggagcctgga
cctccaggtcagcaagggaatccaggacctcagggtcttcctggtccacaaggtccaatc
ggtcctcctggcgagaaaggaccacaaggaaaaccagggcttgcgggacttcctggtgct
gatgggcctcctggccatcctggaaaagaaggccagtctggagaaaaaggtgctctgggt
cctcctggtccacagggtcctattggctaccctggtccccgaggagtaaagggagcagat
ggcgtcagaggcctcaagggctctaaaggtgaaaagggtgaagatggttttccaggattc
aaaggtgatatgggtcttaaaggtgataggggagaagttggtcaagtaggtccaagagga
gaagatggccctgaaggacccaaaggtcgagcaggtcctactggagaccctggtccttct
ggtcaagcaggagaaaaggggaaacttggtgttccaggattaccaggatacccaggaaga
caaggaccaaagggttccactggatttcctgggtttccaggtgccaatggagagaaaggt
gcacggggtgtagctggcaaaccaggccctcggggtcagcgtggtccaacgggtcctcga
ggttcaagaggtgcgagaggtccaaccgggaaacctggcccaaagggtacttcgggcggt
gacggtcctcctggccctcctggagaaagaggccctcaaggacctcagggtccagttgga
ttccctggacccaaaggccctcctggaccccctgggaaggatggcctgccaggacaccct
ggacaacgtggagagactggatttcaaggcaagactggccccccagggccagggggtgtt
gttggaccacagggaccaactggggagactggtccaataggtgaacgaggacatcctggc
cctcctggaccacctggtgagcaaggtcttcctggtgctgcaggaaaagaaggtgcaaag
ggtgacccaggtcctcaaggtatctcagggaaagacggaccagcaggactacgtggtttc
ccaggtgaaagaggtcttcctggagctcagggtgcacctggactgaaaggaggagaaggt
ccccagggcccaccaggtccagttggttcaccaggagaacgtggatcagcaggtacagct
ggcccaattggtttgccagggcgtccaggaccccagggtcctcctggtccagctggagag
aaaggtgctcctggagaaaaaggtccccaaggccccgcagggagagatggagtccaaggt
cctgtgggtctcccagggcctgctgggcctgcgggctcccctggagaagatggagacaag
ggtgaaatcggtgaacccggacagaagggcagcaagggtgacaaaggagaaaatggtcct
cctggtcccccaggtcttcagggtcctgttggcgcccctggaattgctggaggtgatggc
gagccaggtcccagaggtcagcagggcatgtttggacaaaaaggtgatgagggtgccaga
ggtttcccaggacctcctggtcccataggtcttcagggactgccaggcccgcctggtgaa
aaaggtgaaaatggggatgttggtcccatgggtccacctggtcctccaggcccaagaggt
cctcaaggtcccaatggagctgatggaccacaaggacccccaggatccattggttcagtc
ggtggtgttggagaaaagggtgaacctggagaagcagggaacccggggcctcctggagaa
gcaggcacaggcggccccaaaggggaaagaggagagaaaggagaggctggcccgcctggt
gctgctggacctcctggtgccaagggaccaccaggtgacgatggccctaagggtaacccg
ggtcctgttggttttcctggtgatcccggtcctcctggagaacctggccctgcaggtcaa
gatggtgttggtggtgacaagggtgaagatggagatcctggtcaaccgggtcctcctggc
ccatctggtgaggctggcccaccaggtcctcctggaaaaaggggtcctcctggagctgca
ggtgcagagggaagacaaggtgaaaaaggtgctaagggagaagcaggtgccgagggtcct
cctggaaaaactggtccagtcggtccccagggacctgccggaaagcctgggccagagggt
cttcggggcatccctggcccagtgggagaacaaggtctccctggagccgcaggccaggat
gggcctcctggtcctatgggacctcctggcttacctggtctcaaaggtgaccccggctcc
aagggtgagaagggacatcctggtttaattggcctgattggacctccgggagaacaaggt
gaaaaaggtgacagaggactccctggaactcagggatctccaggagcaaagggggatgga
ggaattccaggtcctgctggtcccataggtccacctggtcctccaggcttaccaggtcct
caaggtccaaagggaaccaaaggctctgctggacctgccggccagaagggtgacagtggt
cttccagggcctccaggacctccgggtccacctggggaagtcattcagcctttaccaatc
ttgtcacccaagaaaacaagaagacatgctgaaaacatgcaagcagatgcaggggataat
attcttgattactcggatggaatggaggaaatatttggttctctcaattccctgaaacaa
gacatcgagcatatgaagtttccaatgggtactcagactaacccagcccgaacttgcaaa
gacctgcaactcagccatcctgacttcccagatggtgaatattggattgacccaaaccaa
ggttgctcaggagattccttcaaagtttactgtaatttcacatctggtggtgagacttgc
atttatccaaacaaaaaatctgaaggagtgagaatatcatcttggccaaaggagaaacca
ggaagctggtttagtgaatttaagagaggaaaactgctttcctatttagatgttgaagga
aattccattaatatggtgcaaatgacattcctgaaactgctgactgcctctgctcggcag
aatttcacctacacctgtcatcaatcagcagcctggtatgatgtgtcatcaggaagttac
gacaaagcacttcgattcctgggatcaaatgatgaggagatgtcctacgacaacaaccct
tacatcaaagcactgtatgatggctgtgcgtccagaaaaggctatgacaaaactgtgatt
gaaatcaatacaccgaaaattgatcaagtacctatcgttgatgtaatgatcaatgacttt
ggtgatcagaatcagaagtttggatttgaagttggtcctgtttgtttccttggctaa
DBGET
integrated database retrieval system
