Canis lupus dingo (dingo): 112640890
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Entry
112640890 CDS
T08371
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clud03036
]
112640890 (HFM1)
Enzymes [BR:
clud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112640890 (HFM1)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112640890 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Hfq
Motif
Other DBs
NCBI-GeneID:
112640890
NCBI-ProteinID:
XP_035574122
LinkDB
All DBs
Position
6:57211858..57352204
Genome browser
AA seq
1481 aa
AA seq
DB search
MLKSNDSLFSLDTLFFEKPDEAENYPDNEKLLDWFLPPVPLISEIPDTQALEEEIESHKL
LGQEERPKMLPSNLKMTNENTNYISPTQKFQFAFSSNKCETGDLNLTEAGNHDLPRVPGK
LTYGSQKYKNHIGTEIAPEKNVSGNTKLVNFAEDKGESTSAFRKRLFKISDNIHEGVYSN
DSTNLESSVGSVKIVPTEMNKGESWKCSNSKQKHQYSDINMFTASNAVSASEIREDIFKG
PTFSVASQPHEVQGVTENDLDSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRN
FVICAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGPIG
LNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVKD
ENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAVSATIPNAEDIAEWLSDGERPAVC
LKMDEKHRPVKLQKVVLGFPCGSNQTEFKFDLTLNYKIAGVIRTYSDQKPTLVFCATRKG
VQQAASVLVKDAKFIMAVEQKQRLQKYAYSIRDSKLRDILIHGVAYHHAGMELSDRKVVE
GAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRPQ
FDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWI
RSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLHDLSSLDLIRMDEDVNFKPTE
AGRLMAWYYITFETVKKFCTISGKETLLDLVTMISSCKEFVDVQLRINEKKILNTLNKDP
NRVTIRFPMEGRIKTREMKINCLIQAQLGCIPIQDFALTQDISKIFRNGSRITRWLSDFV
AVQEKFAILLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAMVNAGLTSFKKIEETD
ARELELILNRHPPFGTQIKETVMYLPKYEVEVEQIARYSDTMAEILVTIILRNFEQLQAR
RTSPDSHYVTLIIGDADNQLVFKHKIMDSVLLKAGNWTKKIDVRRAFKSEDLSINLISSE
YVGLDIQQKFTVFYLGPRRLGNQIIMQKKSETEISHSKHSNRSTIAGPNKGMTACRKPGN
RECNHHCKNKHTCGHDCCKTGVAQKSETKEPTISSYLSDLRNRNAVSSLPPVKRLKMQMN
KSRSVDLKEFGFTPKPSVPSISRSECLNIPGLSVMEERDQRDFCVKVQQEPSEYEDKDFS
RWNYSATSNEKSPQTVLFNRHLNASGNQNLTDGDKSNSPSSEVLNVNFELGNEVWDDFDD
ENLLEVTSFSASTEKTKTSGFGNTLSSSTRGSKLLLQEPKSKFQGEMTKSFVSSHGKPDT
YLSNSPVFEFDTSSLTKLPQQAGNTTIVHSQERKQQNLSPEIGKLCFTHSKKIPNSSHFV
KKVDFFIRNNECKEEIDFSRYHPDDEADEMKSFLGIFDDIF
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgactccttgttttctttggatactttgttttttgaaaaaccagat
gaagctgaaaactatccagacaatgaaaaattattggattggtttctcccacctgttcca
ttgatttcagaaattccagatactcaggcattagaggaggaaatagaaagtcataaactg
ttaggtcaggaagaaaggccaaaaatgttaccatcaaatttaaagatgactaatgaaaac
acaaattatatttcaccaacacaaaaattccaatttgccttttcctcaaataaatgtgaa
acaggtgatctgaatttaacagaagcaggtaaccatgacttaccacgtgttcctgggaag
ctgacctatggttctcagaaatacaaaaatcacattggcaccgagatagcacctgagaaa
aatgtttcaggtaatacaaaattagtaaattttgcagaagataaaggagagagcacatca
gccttccgaaaaagattatttaaaatatctgacaatatacatgagggtgtttattctaat
gacagtacaaacttggagtcttctgttggctcagtgaaaattgtcccaacagaaatgaac
aaaggggaatcatggaaatgtagcaatagtaagcagaaacatcaatattcagacattaat
atgtttacagcaagcaatgctgtttcagcttctgaaatcagagaagacatattcaaagga
ccaactttttcagttgcatcccaacctcatgaagttcaaggggtaacagaaaatgattta
gattctttgaaggctgtcacagaaatccctgcaaaatttagaagtattttcaaagaattc
ccatatttcaactatatacagtccaaagcttttgatgatcttctttacacagataggaat
tttgtgatttgtgctccaactggttctgggaaaactgtggtgtttgaactagctataaca
agattgttaatggaagtaccattgccatggtcaaacataaaaattgtttatatggcacca
ataaaagccctgtgtagtcagcgtttcgatgattggaaagaaaaatttggaccaatagga
ttgaattgtaaagaactcactggagatacagtaatggatgacctatttgagatccaacat
gcccatattattatgacaactcccgaaaaatgggatagcatgactaggaaatggagagac
aactctttggtccagctggttagactctttctcattgatgaggtacatgttgtaaaagat
gaaaatcggggaccaactcttgaagttgtagtcagcagaatgaaaactgtacagtcttta
tctcctccttcagaaaatagtacagttattccaatgagatttgtagctgtgtctgcaacg
attccaaatgctgaggatattgcagaatggctttcagatggtgaaagacctgcagtatgt
ttgaaaatggatgagaaacataggccagtgaaacttcagaaagtggtccttggattcccc
tgcggaagtaaccaaactgaatttaagtttgatttaaccctcaactacaaaattgctggt
gttatacgaacatactctgatcagaaacccacacttgtgttttgtgcaacaaggaaaggt
gtgcaacaggctgcttctgttctagtgaaagatgccaaatttattatggctgtggaacag
aaacagaggttacagaagtatgcatattccataagagattcaaaactgagagatatctta
atacatggtgttgcttatcatcatgctggtatggagctgtcagatagaaaagtagttgaa
ggagctttcactgttggagatctaccagttctttttactaccagtactttagctatggga
gtaaatttgcctgctcacctagtagttataaaatctacaatgcattatgctggaggaatg
tttgaagaatatagtgaaacagatattctacagatgattggtagagctggtcgacctcaa
tttgatactacagctactgcagttattatgactcggttaagtacaaaagagaagtatatt
cagatgttagcttgtagtgacactgtagaaagcagtttacacagacatcttatcgaacat
ttaaatgcagagatagtgttacataccatcacagatgtgaatattgctttggaatggata
cgatcaactttgctttatatcagagccttgaaaaatccatctcattatggttttgcatct
ggattgaacaaagatggaattgaagcaaaattacaagaattatgtttgaagaatctgcat
gatttatcatctctggacttgataaggatggatgaagatgttaatttcaaacctactgag
gcaggaagattgatggcttggtattacattacatttgagacagtgaagaaattttgtact
atcagtggaaaagagactttattagatctggtcacgatgatatccagctgcaaggaattt
gtagatgtgcagttaaggataaatgaaaagaaaatattgaatactttgaacaaagatcca
aatagagtaactatcagatttccaatggaaggaagaattaaaacaagagaaatgaaaata
aattgtcttatacaggctcaactaggatgcattcccatacaagactttgctttgacacaa
gatatctcgaagatttttagaaatggctcacgaattacaagatggttgtcagattttgtg
gctgttcaagaaaagtttgctatattattgaacagtttgattttagctaaatgttttaga
tgcaaactttgggaaaactctctacatgtatccaaacagctggaaaaaataggtataaca
ttgtcaaatgcaatggtaaatgcaggtttgacttcctttaaaaaaatagaagaaacagat
gcaagggaacttgaactgattttaaatagacaccccccttttggaacgcaaataaaagaa
acagtgatgtatctaccaaaatatgaagttgaagtggaacagattgcaagatacagtgat
accatggcagaaatattagtgacaattatattaagaaactttgaacagctacaagctaga
agaacatcaccagattctcactatgttaccttaatcataggtgatgcagataaccagctg
gtttttaagcacaaaattatggattctgttttattaaaagctggaaattggactaaaaag
attgatgtgaggagagcttttaaatctgaagatcttagcataaatctaattagttctgag
tatgttggacttgatattcagcagaaatttacagtcttttacttaggacccaggaggctt
ggaaatcaaataattatgcaaaaaaaatcagaaacagagatttcccattctaaacattca
aatagatctactatagcaggacccaataaaggaatgactgcttgcagaaaacctgggaac
cgagaatgtaatcatcactgtaaaaataaacacacatgtggacatgactgctgtaaaact
ggagtggcacaaaagtcagaaacaaaagagccaacaatctcttcatatttatctgattta
agaaacaggaatgctgtttcatcacttcctccagttaaacgtctcaagatgcaaatgaat
aaatctcgaagtgtggaccttaaagaatttggttttactccaaaaccttctgttcccagt
atatcaaggtcagagtgtttaaacatacctggattgtctgtaatggaggagagggatcag
cgtgatttctgtgtaaaagttcaacaagaaccgtctgaatatgaagacaaagatttctct
agatggaactattctgcaacttcaaatgagaaatcccctcaaacagtgctgttcaacaga
catcttaatgcatctggaaaccaaaatttgacagatggggataaaagtaattctccatcc
tcagaagttttgaatgtgaactttgaattgggaaatgaagtttgggatgattttgatgat
gagaacttattagaagttactagtttttcagccagtactgagaagacaaaaacatcagga
tttggaaacactttgagttcaagtaccaggggaagtaagctattgctccaagagccaaag
agcaaattccaaggagaaatgacaaaaagttttgtttcatcacatgggaagccagatact
tatttatcaaattctcctgtattcgagtttgatacatcctccctgacgaaattacctcaa
caagctggaaatacaactattgtccattcacaagaaagaaaacaacaaaatctgtcacca
gagattggaaagctatgctttactcactctaaaaaaataccaaattcttcacattttgtt
aagaaagtggatttctttattagaaacaatgaatgtaaagaggaaattgatttcagtagg
tatcatcctgatgatgaagctgatgaaatgaagtctttcctgggaatatttgatgacatt
ttctaa
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