Canis lupus dingo (dingo): 112640948
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Entry
112640948 CDS
T08371
Symbol
COL24A1
Name
(RefSeq) collagen alpha-1(XXIV) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04820
Cytoskeleton in muscle cells
clud04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112640948 (COL24A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112640948 (COL24A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clud00536
]
112640948 (COL24A1)
Glycosaminoglycan binding proteins [BR:
clud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112640948 (COL24A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
112640948
NCBI-ProteinID:
XP_025273556
LinkDB
All DBs
Position
6:61752272..62140015
Genome browser
AA seq
1709 aa
AA seq
DB search
MHLGAHRTRRGKVSHTAQTKLLLHFIVLCVAGGVVHAQEQGIDILHQLGLGGKDVRHSSS
VTAVPSSSTSLPQGVHLTELGVILTNDAYIESPLMKILPFNLEQPFTILIGLQSHRVNNA
FLFSIRNKNRLQLGVQLLPKKLVVYLGGKQSVFFNYSVHNERWHSFAITIRNQVVSMFVE
CGKKSFSRETLSEVQTFDSNSVFTLGSMNNNSVHFEGILCQLDIIPSAEVSADYCRYMKQ
RCRPEISLLHTTIKPAEILENSPLPKKFGEKVLSEDTFTKGKSIPNMINNDSATVRKQQG
LQMSKSQSMSLHSSNVSAVDLVNHGIQAKEMITEEHTQTNLSLSVTHHLLNKARAKSKEK
FSSLPNVSDNVTQHNDRVTGLLPFKKISSVLPHIKQETMINLKKAIAANLHTNELMEPQQ
ILNTTLYRVTDEPSVDNHLDLRKEGEFDPDATYPIENSYETDLYDYYYYYEDLNTMLEME
TLRGPKGDPGPPGPPGPAGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQ
AVPGEKGNQGLSGLMGPPGMQGDKGLKGYPGLPGPRGEPGIPGFTGNIGSRGYPGRQGLA
GPEGNPGPKGVRGFIGSPGEVGQLGPEGERGVPGIRGKKGLKGRQGFPGDFGDRGPAGPD
GSPGLVGSIGPPGFPGLRGNIGPIGPLGPSGIPGPMGLSGNKGLPGIKGDKGEQGIIGEP
GEPGYPGDKGAVGVSGPPGMRGKPGPSGQVGDPGPQGPCGPPGPEGFPGDIGIPGQNGPE
GLKGLLGNRGPPGPPGLKGLQGEEGPIGPFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQ
GNIGKIGETGPIGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGDPGPIGPL
GLPGHVGARGPPGSQGPKGQRGPRGPDGLLGEQGIQGAKGEKGDQGKRGPYGLIGKTGNP
GERGVQGKPGLQGPPGSTGERGLEGEPGPRGLQGDAGPPGEMGAEGPSGIEGESGLPGEP
GAKGNVGPAGNVGVAGEPGLRGEPGAPGEEGLQGKDGLKGNPGGRGLSGEDGEKGETGLP
GATGPLGRPGLMGPPGPEGIVGSPGQRGRPGKKGDKGQIGPTGEIGNRGAPGQIGESGPK
GARGTRGAVGHLGLIGPDGEPGIPGYRGHQGQPGLPGLPGPKGEKGYPGEDSTVLGPPGP
RGEPGIIGEQGERGEPGEEGYKGHVGLPGPRGATGQQGPPGEPGDQGEQGLKGERGSEGP
KGKKGAPGPSGKPGIPGLPGLPGPKGIQGYHGADGLSGNSGKAGLPGNQGVPGTRGSPGR
TGLTGSPGPRGAKGSSGLPGSPGVPGPKGEQGLPGEPGIQGKRGHRGAQGDQGPCGEPGL
KGQPGEHGVQGLTGFQGFPGPRGPEGDAGIVGISGPKGPIGQRGNTGPFGKEGIIGPTGR
TGPRGEKGFRGEAGPQGPRGQPGPPGPPGAPGPRKQMDINAAIQALIESHTALQMESYQN
TEVTLMDYSAEIFKTLNYLSNLLRSIKNPLGTRDNPARICKDLLNCEHKVSDGKYWIDPN
LGCPSDAIEVFCNFSAGGQTCLSPVSVAKLEFGVGKVQMNFLHLLSSEATHIITIHCLNT
PVWTSAQSSGSGLPVGFKGWNGQIFEENTLLEPKVLSDDCKIQDGSWHKAKFLFHTQDPN
QLPVIEVQKLPHLKTERKYYIESSAVCFL
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaggagcccacaggacaaggcgtggaaaggtctcccacacggcacaaacgaaa
ctgctccttcattttattgtgctatgtgtggcagggggtgttgttcatgcacaagaacaa
ggcatagacattcttcatcaactaggccttggaggcaaagatgtaagacactcatcatca
gtgactgctgtaccatcatcatctacatcattacctcagggggtccacttaacagaatta
ggtgtcattttaacaaatgatgcttatattgagtcacctctcatgaaaattttaccattc
aacttagaacagccatttacaatattaattgggttgcagtcacatagagtaaacaatgca
tttctcttcagcattagaaataaaaatagactgcaattaggagtgcagttattacctaaa
aaattagtagtataccttggaggaaagcagtctgtatttttcaactacagtgttcacaat
gagcgatggcactcatttgccattactattagaaaccaagttgtctcaatgtttgttgag
tgtggaaagaaatcttttagcagagagactctttcagaagttcagacttttgattctaac
agtgtgtttaccttaggaagtatgaataataattctgtccattttgaaggaatactatgt
cagttagatattattccttctgcagaagtatctgcagactattgtagatatatgaaacag
cgttgtcgccctgagataagccttcttcatacaaccatcaaaccagctgaaatactggaa
aactctcccttgcccaaaaaatttggtgaaaaagtgctgtcagaggacacatttaccaaa
ggcaaaagcatcccaaatatgataaataatgattctgcaacagtccgtaaacagcaagga
ctccagatgtcaaaatctcagtcaatgtctcttcattcaagcaatgtgtctgctgtggat
cttgtaaaccatggaattcaggccaaagaaatgattactgaggaacatactcagacaaat
ttaagcctgtcagtgacccatcatctccttaataaggcgagagcaaagagcaaggagaaa
tttagttctctcccaaatgtatctgacaatgtcacacaacataatgatagagtaactggt
ctgctaccatttaagaagatatcatctgttcttccacatataaaacaagaaacaatgatc
aatctcaagaaggctattgcagcaaatctacacactaatgaactcatggaaccgcaacag
attttaaacacaaccttatacagagtgacagatgagccgtctgtggacaatcaccttgac
ctgaggaaagaaggtgaatttgatcctgatgctacctatcccatcgaaaatagctatgag
actgacctttatgattattattattattatgaggatcttaatacaatgctcgaaatggag
actctaagagggccaaaaggggaccctggacctcccggtccaccgggtccagcaggtatc
ccaggtccatccggaaagagaggtccacggggcataccggggccacatggaaatcctggg
ttacctggattgccaggtccaaagggccccaaaggagatccaggattttcccctggtcaa
gctgttcctggagaaaagggcaatcaaggcctttctggattaatggggccccctggtatg
caaggtgataagggactcaaaggctatccagggctcccaggaccccgaggtgaaccagga
attccaggattcactggtaatattggttcacgtggttaccctggcaggcagggtttagct
ggaccagaaggtaatccaggtcctaaaggtgtacgaggttttattggctctcctggagaa
gtaggacaactgggacctgaaggagaaagaggtgttcctgggatccggggaaagaagggt
cttaagggaagacagggttttccaggtgactttggagacagaggccctgctggccctgat
ggcagtcctggtcttgtaggtagcattggtcctccgggatttcctgggcttagaggcaat
attggccctattggaccacttggaccttctggaattccaggcccaatgggtctttccggg
aataagggcctacctggaatcaaaggtgataagggtgaacaaggcattataggagagcca
ggagaaccagggtatcctggagacaagggtgctgttggtgtttcaggaccaccagggatg
agaggaaagccagggccttcaggccaggtgggtgacccaggaccccaaggaccatgtggc
cctccaggaccagagggttttccaggagatattgggattcctggacagaatggccctgaa
ggattaaagggactccttggaaataggggacctcctggacctcctggtctcaaaggactt
cagggagaagaaggaccgattggaccctttggagaactggggccaagaggaaaaccaggt
caaaaggggtatgcaggtgaaccaggaccagaaggcttaaagggagaagttggagatcaa
ggaaacattggaaagattggtgaaacaggacctattggtttacctggagaagttgggatt
acaggaagcattggtgaaaagggagaacgtggcagtccaggtccactaggtccccagggg
gaaaagggtgttatgggatatccaggtcctcctggggatccaggacccattggtccactg
ggattacctggtcatgtgggggcaagaggaccacctggaagtcagggtcctaaaggacaa
agagggccaaggggaccagatggtctcttaggggaacaaggtatacaaggtgccaagggt
gaaaaaggagatcaaggaaaaagagggccttatggtcttattggtaagactggaaaccct
ggagagagaggagttcaagggaaaccaggtttacaaggaccccctgggagtacaggagag
aggggacttgaaggagaaccaggaccacgaggattgcaaggtgatgctggacctcctgga
gaaatgggtgctgagggaccttcaggtattgagggagaatctggcctgccaggtgaacca
ggtgcaaagggaaatgttggacctgcaggcaacgttggagttgctggagaaccagggtta
cggggtgaaccaggagctcctggagaagaaggtctccaaggaaaagatggattaaagggg
aacccaggaggaagaggtctctctggagaggatggagaaaaaggagagacaggcctacca
ggggctacagggcccttgggtagaccaggtctaatgggccctccgggacctgaaggaatt
gtgggaagtccaggacaaagaggtcgtccagggaaaaagggtgacaaaggacaaataggg
cccacaggagaaattggaaacagaggtgctcctggacaaattggggaaagtggtcctaag
ggtgccagaggaactagaggtgctgtgggacatttaggattgattggacctgatggagaa
ccaggaattccaggatataggggtcatcagggtcaaccaggacttcctgggttgccagga
cctaaaggagaaaagggttatccaggagaagatagcacagtactaggaccacctgggcct
cgaggtgaaccaggtattatcggggaacaaggagagagaggagagcctggagaagagggc
tataagggtcatgtgggtttgccaggaccaagaggtgctactggacaacaagggccccca
ggtgagccaggtgaccaaggtgagcaaggactaaaaggagagagaggatctgaaggtcct
aaggggaaaaaaggagctcctggtccttctggaaaacctgggattcctggtcttcctggc
ctacccgggccaaaaggcattcaaggataccatggagctgatggcctttcaggaaactct
ggaaaagctgggctaccaggaaaccagggagttcctggcaccaggggcagcccaggaaga
acaggactgactgggtctccaggtcctcgaggagccaaggggtcatcaggccttccggga
agcccaggggttccaggcccaaagggtgaacaagggctacctggtgaacctggaattcaa
ggtaaaagaggtcaccgaggagcacaaggtgatcaaggaccatgtggagagcctggtctg
aaagggcagcctggagaacatggcgttcaaggtttgacaggtttccaaggattcccaggc
cccagaggtcctgagggagatgctggcattgttggaatatcgggtcctaaaggtcctatt
ggacagagaggaaacactggcccctttggcaaagaaggtataataggcccaacaggtaga
actggacccagaggtgaaaaaggctttcgaggtgaagctggtcctcaagggccaagaggt
caaccagggcctccaggtccacctggagcaccaggcccaaggaaacaaatggatatcaat
gctgctattcaagccctgattgaatcacatactgccctacagatggagagctaccagaat
accgaagtgactttaatggactacagtgcagagatattcaagaccctgaactaccttagc
aatttactgcgcagcatcaagaatcctcttggcacacgagataacccagcacgaatctgc
aaagatttgcttaactgtgaacacaaggtatcagatggaaaatactggattgatccaaat
cttggatgcccttcagatgccattgaggttttctgtaatttcagtgctggtggtcagaca
tgtttatctcctgtttctgtagcaaagttggagtttggagttggaaaagtccagatgaac
ttccttcatttactgagctcagaagccacccatatcatcaccattcactgtctaaacacg
ccagtgtggacaagtgctcagtcaagtggctcaggattgcctgttggcttcaaaggatgg
aatggccagatttttgaagaaaacactctacttgaacctaaggtgctttcagatgactgc
aagattcaagatggcagctggcataaggcaaaattcctttttcacacccaggaccctaat
cagcttccagtaattgaagtacaaaaacttcctcatctcaaaactgaaaggaaatactac
attgaaagcagtgctgtatgctttctatga
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integrated database retrieval system
