KEGG   Canis lupus dingo (dingo): 112641254
Entry
112641254         CDS       T08371                                 
Symbol
MDC1
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
clud  Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:clud00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clud03400]
    112641254 (MDC1)
DNA repair and recombination proteins [BR:clud03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    112641254 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 112641254
NCBI-ProteinID: XP_025273883
Ensembl: ENSCAFG00020018325
LinkDB
Position
12:complement(587477..600938)
AA seq 1912 aa
MEDTQAINWEIEEEEETERPSEALGRGLEPVGRLHIFSSAHGPEKDFPLYLGKNMVGRMP
DCSVTLPFSSISKQHAVIEILAWDKAPVLQDCGSLNGTQVLRPPKVLSPGVSHRLRDQEL
ILFADLPCQYHRLNVPLPFVSRGPLTVEETPRVQGGTQPQGLLLAEDSEEEVDSPSERCV
VKEPRTSPLAAVVPESDEEGPSPAPDGPGPPFAFNLDSDTDEEESQHSAAGEASLSARRG
STAETEQLKAMTPATQLGKDQCSVKERNNNTKVERDARNGVVSLGGILERNQSAGEDSDT
DVDESRPPVRPAEVHLERAQPSDFIDSDTDVEEERIPATPAVVPMKKRQIFHRVSTKSLQ
EPALVHLQEIPAGNDTDVEESEIQLAVPLERNQISMVIDSNTDDEEEVLAALTLARLKES
GSDTWNRGTDVEEDRAQPVALLEPSQTSAGRDSKTDMEEEGLPMENRRTVPKCHTDKACS
EKRQFPLQDSDLEVDEDKSLLEVHLERNQASATIDITQVEEKVLPGPAIILVEKHQVPVV
WTDQTYVEVEGGQAKLPVMHLGEPQPPLSEDCGTDVEEDTSLAASLVADTGKHQLLAEGD
AGTESAAPVLEQERVLEARAQGVSLVSQVEQDLLPVSKENLIDLVVDTGTSGETIQPQKE
GAQTPTERKREPHVDRTKNCGDNHGDSEDLDLQATQCFVERENQSPEAVQSMEDEATQAF
LATLPQESGPSYYSFQASGALDEPWEVLATQPFCPRESEASEPQPIAAHIDAHGSCPSTP
RTAPQAQHPESPVHAEPLGIQGRGMQTVEKDMGTPREAPEEVAPERGPLDRETKKLPAGE
REDVLGEELTRGIRVLARDNQGQESDQKVKSASTERNMESLNIEIEIPREAQEKETEKQS
IAREIFEREAEKPVVEREGEPSGLGMKVPEVKLERGPQRGEIEKGSQDQEGQASSLTPEP
SAGMGAQQGLASVPEASGSQSGGAPMSPSRQERGHLTCKAPPAEKASVGDQESADAHLPA
AVPEASTPHHNPLLSQSQKHPVSQPFLSSSPSSLEPIPRTRQNGNQEVPGTPLSSEMEPL
YPKSKVRLRGSSRKTLSAISSLALEPHSTIPTDQPLCPEPTSRVTRGRTRRSSLKTPELL
VPEVQPSTSKDQSVTAEPISQGRTRKSVKAPEPVVSTATQSRALRSSVKTPKVDISTTPA
LQPSTSKDQPVTPEPTSQVTWGRTRRSSVKIPEPTVPTAPALQPSTSEDQSVITEHTSGG
THRRTRRSSVKTPEPIVPTAPEFQPTIPRDQPVTPEPTSQVTWGRTRRSSVKTPEPTVPT
APELQPSTSKDQSVITEPTSGATHSRTHRSSLKTPKPTVPTATELQPTTHKGQPVTPKRI
SQGRTPKSSSKTNTSVVSTVPELQACTPTDQPVIPKLAFQATRGRTQRFSIETPEPVAPT
VPEPQPSISTDQPVTPEPTSRATRGRTHRSFVKMPQPIEPTAPDLESVTPTDQLFSPKVQ
GSQGKMLRSSTISAVPVLTTPEFQPSVPTDQPIPPEPISQANCSRRLRATRNHESLIAPI
ICEPYSALPEPKSRSSRNQRQRAVRTVESLRTIPKPAFAQLPEAPTHATQIHKLEAAGRS
EFTLGPPPKASQSHKRPLATVDSPPPQKRHQRGEVTQETVFLKEEEEDPMERPREEEDVV
VPGPGKRKRDQAEEEPKRIPSRSLRRTKPNQESTVPKVLFTGVVDARGERAVLALGGSLA
SSVAEASHLVTDRVRRTVKFLCALGRGIPILSLDWLHQSHKAGCFLPPDEYVVTDPEQEK
NFGFSLRDALSRAREQRLLEGYEIHVTPGVQPPPPQMGEIISCCGGTVLPSMPRSYKPQR
VVITCSQDFPRCSIPFRIGLPILSPEFLLTGVLKQEAKPEAFIFSTLEMSSS
NT seq 5739 nt   +upstreamnt  +downstreamnt
atggaggacacccaggctatcaactgggagattgaagaagaggaggagacagagagaccc
agtgaagccttggggcgtggcttagagcctgtagggcggttgcatatcttcagtagtgcc
catggaccagaaaaagattttcccctgtatcttgggaagaatatggtaggccgaatgcct
gattgctctgtgaccctgcccttttcatccatctccaaacaacatgcagtcattgaaatc
ttggcctgggacaaggcacctgtcctccaagattgtggcagcctcaatggtactcaagtc
ctaaggcctcctaaggtcctaagcccaggggtgagtcatcggctgagggaccaggagttg
attctctttgctgacttgccctgccagtaccatcgcctgaatgtccccctgccctttgtt
tcccggggtcctctaactgtagaagagacacccagggtacagggaggaactcaaccccag
gggctcctgttggctgaggactcggaggaggaagtagattctccttctgaaaggtgtgtg
gtgaaagaaccaaggacctcccctttggcagcagtagttccagagagtgatgaagagggg
ccttctcctgccccagatggccctgggccaccttttgccttcaacctggacagtgacaca
gatgaggaagaaagtcagcattcagcagcgggagaggcctccttatctgccagaagaggc
tccactgcagaaacagaacagctgaaagctatgacacctgcaacccagcttggaaaggat
cagtgttcagtgaaggagaggaacaataacacaaaagttgagagggatgcaaggaatggg
gtggtctcacttggggggattctggagagaaaccaaagtgctggggaagacagtgacaca
gatgtggatgagagcaggcctccagtaaggcctgctgaagtccatttagaaagggcccaa
ccttctgatttcatagacagtgatactgatgtggaagaagaacggatccctgcaacacca
gctgtagttcctatgaagaagaggcaaatcttccacagagttagtacaaagagtcttcag
gaacctgctttggtacatctacaggagatcccagctggtaatgatacagatgtggaggaa
agtgagatccaactggcagtccctctggagagaaaccaaatttccatggtgattgacagc
aatacagatgatgaggaagaagtcttagcagcactcactttggcacgtctgaaagagagc
ggatctgatacatggaacagaggtacagatgtggaagaggacagggcccaacctgtggcc
cttctggagccaagccaaacctctgctgggagagatagtaagacagacatggaggaggag
ggtctcccaatggaaaacagaagaactgtgcccaagtgtcatacagacaaggcatgctca
gaaaagaggcagtttcctctccaagacagtgatctagaggtagatgaagataagagctta
cttgaggtccacctggagagaaatcaagcctctgccaccatagacatcacacaagtggaa
gagaaagtcctaccaggaccagctattatacttgtggagaagcatcaggtgcctgtggta
tggacagatcaaacatatgtggaagtagaagggggccaagcaaagctgcctgtgatgcac
ctaggggaaccccagcctcctctatctgaggactgtgggacagatgtggaggaggacaca
tccttagcagcctcactggtggcagatactggaaagcaccagcttctagcagaaggagat
gctgggacagaatcggctgcaccagttcttgagcaggagagagttcttgaggcgagggcc
cagggggtttcacttgtatcacaggtggagcaagatcttctccctgtctcaaaggagaac
cttatagatctggtggtggacacaggcacttcaggagaaaccatccaaccacagaaagag
ggagcccagacccccacagaaaggaagagagaaccacatgtggacaggaccaagaactgt
ggagacaaccatggtgattctgaagacctggacctacaggctacccagtgctttgtggag
agagagaatcagagcccagaagcagtccagagcatggaggatgaagccactcaggccttc
ctggctactctaccccaagagtctggcccttcctattacagcttccaggcctcaggtgcc
ctggatgagccgtgggaagtcttggcaacacagccattctgtccaagagagtctgaggcc
tctgagccccagcccattgctgcccacattgatgcccatggatcttgcccctctacacct
aggacagcaccacaagcccaacatccagagagcccagttcatgcagagccactggggatt
caaggcagagggatgcagactgtggagaaagacatgggtacaccaagagaagcaccagag
gaggtggcccctgagagaggcccattggacagggaaaccaagaagctgccagcaggagag
agagaagatgtgttaggagaagagttaactagagggatacgggtgttagctagagataat
cagggacaagagtctgaccaaaaggtgaaaagtgcaagtactgaaaggaacatggagagt
ttaaacatagaaattgagatacccagggaggcacaagagaaagagacagaaaagcagtct
attgcaagagaaatatttgaaagagaagcagagaaaccagtagtagagagagagggtgag
ccaagtggattaggcatgaaggtaccagaagtaaaactggagagaggcccacagagaggg
gagatagagaaagggagccaagaccaggaagggcaggcctccagtctaacaccagagcct
agtgcagggatgggggcccagcagggacttgcttcagtcccagaagcttctgggagccag
tcaggtggagccccgatgagccccagcaggcaggagagaggccacctgacttgcaaggcg
ccacctgctgagaaggcctctgtgggtgatcaggaatccgcagatgctcatctgcctgct
gcagtgcctgaagcttcaaccccacaccacaaccccctcctctctcagagtcaaaaacat
cctgtgtctcagcccttcctttcttcctctccatcttctttagagcccattcccaggacc
aggcaaaatgggaatcaggaagttccagggactcctttatcctcagagatggagcctctg
tacccaaaatccaaagtcaggctccgagggtcctccaggaagacactctctgcaatttct
tctttagcccttgaacctcactcaaccatccccacagaccagcccctctgtcctgagccc
acatctcgggtcactcggggcaggacacgtaggtcctctctgaagacccctgaactcctt
gtccctgaagtccagccttccacctccaaagaccagtctgtcactgctgagcccatatct
caaggcaggacacgtaaatctgtcaaggctcctgaaccagttgtctccacagccactcag
agcagggcacttaggtcttctgtcaagactcccaaagtagacatctccacaacccctgcg
ctccagccttctacttccaaagaccagcctgtcacccctgagcccacatctcaggtcact
tggggcaggacacgtaggtcctctgtcaagatccctgaaccaactgtccccacagcccct
gcactccagccttccacctctgaagaccagtctgtcatcactgagcacacatctgggggc
actcacaggaggacacgtaggtcttctgtcaagactcctgagccaattgtcccaacagct
cctgaattccagcctactatccccagagaccagcctgtcacccctgagcccacatctcag
gtcacttggggcaggacacgtaggtcctctgtcaagacccctgaaccaactgtccccaca
gctcctgaacttcagccgtctacctccaaagaccagtctgtcatcactgagcccacatca
ggagccactcacagcaggacacacaggtcttctctcaagactcctaagccaactgtcccc
acagccactgagctccagcctaccacccacaaaggccagcctgtcacccccaaacgtata
tctcagggcaggacacctaagtcttctagcaagactaacacatcagttgtctccacagtc
cctgagctccaggcttgtacccccacagaccagcctgtcatccccaaacttgcatttcag
gccactcggggtaggacacaaaggttctctatcgagacccctgaaccagttgcccccaca
gtgcctgaaccccagccttccatctccacagatcagcctgtcactcctgagcccacatct
cgggccactcggggcaggacacataggtcctttgtcaagatgccccagccaattgaaccc
acagcccctgatcttgaatctgtcacccctacagatcaactgttctcccccaaggttcag
ggaagtcagggtaagatgctaaggtcttctacaataagtgctgtgccagttcttaccact
cctgaattccagccttctgtccccacagaccagcctattccccctgagcccatctctcaa
gccaattgcagcaggaggctgagggccactaggaaccatgagtcccttatagctcccatt
atctgtgagccctactctgcactccctgaacctaaatctcggtcctcaaggaaccaaaga
caaagagcagtgagaacagttgagtccctcaggaccattcccaagccggcctttgcccag
cttcctgaagcccccactcatgctacccagatccacaagttggaggcagcaggcagatcg
gagttcaccctggggcccccacctaaggcctctcagagccacaagaggcctttggctact
gtggattcacccccacctcaaaaacggcaccaaagaggagaagtcacccaggagacagtg
ttcctcaaggaggaggaagaagatccaatggagaggccaagggaggaggaggatgtagtg
gttccaggaccaggcaagagaaagagagaccaagcagaggaggagcccaagagaatccca
agccgcagtcttagacgaaccaaacctaaccaagagtccacagtccccaaagttctcttc
acaggagtggtggatgcccgtggtgagcgggcagtgctggccctgggggggagtctggcc
agctcagtggcagaggcttcccacttggtgactgatcgagtccgccgtacggtcaagttc
ctgtgtgctctggggcgggggattcccatcctctccttggattggctccaccagtcccac
aaggctggttgctttttgcccccggatgaatatgtggtgactgatcctgagcaggagaag
aactttggcttcagccttcgagatgccctgagccgggctcgggagcaaaggttgctggag
ggctatgagatccatgtgactccaggagtccagccaccaccacctcagatgggagagatc
atcagctgctgtggaggcactgtactacccagcatgccccggtcttataagcctcagaga
gttgtgattacatgctcccaggacttccctcgatgctctattccttttcggattgggctg
cccatcctctcacctgagttcctgctaacaggagtgctaaagcaggaagccaagccagag
gcgttcatcttctccactttggaaatgtcatcctcctga

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