Canis lupus dingo (dingo): 112641393
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Entry
112641393 CDS
T08371
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03320
PPAR signaling pathway
clud04659
Th17 cell differentiation
clud04919
Thyroid hormone signaling pathway
clud04920
Adipocytokine signaling pathway
clud04928
Parathyroid hormone synthesis, secretion and action
clud05200
Pathways in cancer
clud05202
Transcriptional misregulation in cancer
clud05207
Chemical carcinogenesis - receptor activation
clud05216
Thyroid cancer
clud05222
Small cell lung cancer
clud05223
Non-small cell lung cancer
clud05226
Gastric cancer
clud05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
112641393 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
112641393 (RXRB)
03320 PPAR signaling pathway
112641393 (RXRB)
04919 Thyroid hormone signaling pathway
112641393 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
112641393 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112641393 (RXRB)
05202 Transcriptional misregulation in cancer
112641393 (RXRB)
05207 Chemical carcinogenesis - receptor activation
112641393 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
112641393 (RXRB)
05216 Thyroid cancer
112641393 (RXRB)
05222 Small cell lung cancer
112641393 (RXRB)
05223 Non-small cell lung cancer
112641393 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
112641393 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112641393 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clud03310
]
112641393 (RXRB)
Transcription factors [BR:
clud03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
112641393 (RXRB)
Nuclear receptors [BR:
clud03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
112641393 (RXRB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
112641393
NCBI-ProteinID:
XP_025274184
Ensembl:
ENSCAFG00020003098
UniProt:
A0A8C0JNP4
LinkDB
All DBs
Position
12:complement(2749872..2756351)
Genome browser
AA seq
537 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAAGEQQT
PEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLSQGAPPPSPPGLPLPPSSAPTLGGSGAPP
PPPMPPPQLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVK
PPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYS
CRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMP
VDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHF
SSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRS
LSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCK
QKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcggcagcagccggagaacaacaaacc
ccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcc
cgaagcccagacagttcctccccgaatcccctttcccagggggctcctcccccttctccc
cctgggttacccctccccccttcatcagccccaacccttggaggctccggggccccaccc
ccacccccgatgccacccccccaactgggctcccccttcccagtcatcagctcttccatg
gggtcccctggtttgccccctccagctcccccaggattctccgggcctgtcagcagtccc
cagattaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaag
ccaccagtcttaggggtccggggcctgcactgtccaccccctccaggtggtcctggggct
ggcaaaaggctgtgtgcaatctgcggggaccgaagctcaggcaaacactatggggtttac
agctgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggatctgacctactca
tgccgggacaacaaggactgcaccgtggacaagcgccagcgaaaccgctgtcagtactgc
cgctatcagaagtgcctggccactggcatgaagagggaggcagttcaggaggagcgtcag
cgggggaaggacaaggacggggatggggaaggggctgggggagccccggaggagatgcct
gtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgag
ggtcctgggggaaccgggggtagtggcagcagcccaaatgaccctgtgactaacatctgt
caggcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacacttt
tcctccttgcctctggatgaccaggtcatattgctgcgggcaggctggaacgagctcctc
attgcttccttctcccaccgatccattgatgtccgagatggcatcctccttgccacaggt
cttcatgtgcaccgcaactcagcccattctgcaggcgtgggagccatctttgatcggtcc
ctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagaca
gagcttggctgcctgagggcaatcattctgttcaatccagatgccaagggcctttccaac
cctagtgaggtggaggttctgcgggagaaagtgtatgcatcactggagacctattgcaag
cagaagtaccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctc
aggtccatcggccttaagtgtctagagcatctgtttttcttcaagctcattggagacacc
cctattgacaccttcctcatggagatgcttgaggctccccaccagctggcctga
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